| .. |
|
adun
|
- fix PORTSCOUT
|
2009-07-06 07:29:12 +00:00 |
|
ariadne
|
|
|
|
artemis
|
|
|
|
avida
|
- Switch SourceForge ports to the new File Release System: categories starting with B,C
|
2009-08-22 00:15:15 +00:00 |
|
babel
|
|
|
|
belvu
|
|
|
|
biococoa
|
|
|
|
biojava
|
|
|
|
blast
|
|
|
|
blat
|
|
|
|
boinc-simap
|
- Annotate that 8.x no longer needs libmap hack
|
2009-10-01 07:34:28 +00:00 |
|
chemeq
|
|
|
|
clustalw
|
|
|
|
consed
|
|
|
|
crimap
|
|
|
|
crux
|
Update to Crux 1.2.0.
|
2009-09-19 17:58:13 +00:00 |
|
distribfold
|
|
|
|
dna-qc
|
|
|
|
dotter
|
UNBREAK: Probably was a temporary failure, checksums are ok now.
|
2009-09-16 15:57:18 +00:00 |
|
embassy
|
- Update MASTER_SITES
|
2009-08-14 08:33:22 +00:00 |
|
emboss
|
- Update MASTER_SITES
|
2009-08-14 08:33:22 +00:00 |
|
fasta
|
|
|
|
fasta3
|
Update to 35.4.9
|
2009-08-23 15:47:37 +00:00 |
|
fastdnaml
|
|
|
|
finchtv
|
|
|
|
fluctuate
|
|
|
|
garlic
|
|
|
|
genpak
|
- bump all port that indirectly depends on libjpeg and have not yet been bumped or updated
|
2009-07-31 13:57:52 +00:00 |
|
gff2ps
|
|
|
|
gmap
|
|
|
|
gperiodic
|
- bump all port that indirectly depends on libjpeg and have not yet been bumped or updated
|
2009-07-31 13:57:52 +00:00 |
|
grappa
|
|
|
|
hmmer
|
|
|
|
iolib
|
Io_lib is a library of file reading and writing code to provide a
|
2009-08-28 23:34:20 +00:00 |
|
jalview
|
|
|
|
kinemage
|
|
|
|
L-Breeder
|
- bump all port that indirectly depends on libjpeg and have not yet been bumped or updated
|
2009-07-31 13:57:52 +00:00 |
|
lagan
|
|
|
|
lamarc
|
- Mark most of my ports MAKE_JOBS_SAFE=yes
|
2009-05-16 06:27:56 +00:00 |
|
libgenome
|
-Repocopy devel/libtool15 -> libtool22 and libltdl15 -> libltdl22.
|
2009-08-02 19:36:34 +00:00 |
|
libsbml
|
- Update to 4.0.0
|
2009-09-23 01:06:29 +00:00 |
|
linux-foldingathome
|
|
|
|
lsysexp
|
- bump all port that indirectly depends on libjpeg and have not yet been bumped or updated
|
2009-07-31 13:57:52 +00:00 |
|
mafft
|
|
|
|
mapm3
|
|
|
|
migrate
|
|
|
|
molden
|
Bump PORTREVISION for everything that sets USE_FORTRAN=yes which now
|
2009-09-13 00:08:01 +00:00 |
|
mopac
|
- Switch SourceForge ports to the new File Release System: categories starting with B,C
|
2009-08-22 00:15:15 +00:00 |
|
mrbayes
|
Fix LIB_DEPENDS on devel/readline: its sh lib version was bumped recently from
|
2009-05-12 11:28:17 +00:00 |
|
mummer
|
- Update to 3.21.
|
2009-08-28 14:52:05 +00:00 |
|
muscle
|
|
|
|
ncbi-toolkit
|
|
|
|
njplot
|
Convert most of remaining ports that depend on xorg-libraries to
|
2009-06-09 15:33:28 +00:00 |
|
ortep3
|
Bump PORTREVISION for everything that sets USE_FORTRAN=yes which now
|
2009-09-13 00:08:01 +00:00 |
|
p5-AcePerl
|
- Flip MAKE_JOBS_SAFE to MAKE_JOBS_UNSAFE
|
2009-07-07 22:11:07 +00:00 |
|
p5-Bio-ASN1-EntrezGene
|
|
|
|
p5-Bio-Das
|
- Update to 1.14
|
2009-09-08 12:08:12 +00:00 |
|
p5-Bio-Glite
|
|
|
|
p5-Bio-Graphics
|
- Update to 0.982
|
2009-08-28 23:36:45 +00:00 |
|
p5-Bio-MAGETAB
|
Utilize %%SITE_PERL%% and %%PERL_ARCH%% in pkg-plists
|
2009-07-30 23:04:49 +00:00 |
|
p5-Bio-NEXUS
|
Bio::NEXUS package provides an object-oriented, Perl-based
|
2009-08-22 20:39:51 +00:00 |
|
p5-Bio-Phylo
|
- bump all port that indirectly depends on libjpeg and have not yet been bumped or updated
|
2009-07-31 13:57:52 +00:00 |
|
p5-Bio-SCF
|
Bio::SCF module allows you to read and update (in a restricted
|
2009-08-28 23:36:09 +00:00 |
|
p5-bioperl
|
- bump all port that indirectly depends on libjpeg and have not yet been bumped or updated
|
2009-07-31 13:57:52 +00:00 |
|
p5-bioperl-run
|
- Relax check on bioperl version; people keep forgetting to update this check
|
2009-08-02 20:00:08 +00:00 |
|
paml
|
- Update to 4.3
|
2009-08-13 17:00:04 +00:00 |
|
phd2fasta
|
|
|
|
phrap
|
|
|
|
phred
|
|
|
|
phylip
|
-Update to 3.69
|
2009-09-16 14:27:00 +00:00 |
|
phyml
|
PhyML is a software that estimates maximum likelihood phylogenies from
|
2009-07-21 01:10:13 +00:00 |
|
platon
|
Bump PORTREVISION for everything that sets USE_FORTRAN=yes which now
|
2009-09-13 00:08:01 +00:00 |
|
povchem
|
|
|
|
primer3
|
|
|
|
protomol
|
- Switch SourceForge ports to the new File Release System: categories starting with B,C
|
2009-08-22 00:15:15 +00:00 |
|
psi88
|
Bump PORTREVISION for everything that sets USE_FORTRAN=yes which now
|
2009-09-13 00:08:01 +00:00 |
|
py-biopython
|
- Update to 138038
|
2009-09-04 20:41:25 +00:00 |
|
pycogent
|
- Switch SourceForge ports to the new File Release System: categories starting with B,C
|
2009-08-22 00:15:15 +00:00 |
|
pymol
|
- Update lang/python26 and make Python 2.6.2 to the default Python version
|
2009-06-08 22:30:55 +00:00 |
|
rasmol
|
Convert most of remaining ports that depend on xorg-libraries to
|
2009-06-09 15:33:28 +00:00 |
|
recombine
|
|
|
|
ruby-bio
|
|
|
|
seaview
|
- bump all port that indirectly depends on libjpeg and have not yet been bumped or updated
|
2009-07-31 13:57:52 +00:00 |
|
seqio
|
|
|
|
sim4
|
|
|
|
ssaha
|
|
|
|
t_coffee
|
|
|
|
tinker
|
Bump PORTREVISION for everything that sets USE_FORTRAN=yes which now
|
2009-09-13 00:08:01 +00:00 |
|
treepuzzle
|
|
|
|
treeviewx
|
- bump all port that indirectly depends on libjpeg and have not yet been bumped or updated
|
2009-07-31 13:57:52 +00:00 |
|
tRNAscan-SE
|
|
|
|
wise
|
|
|
|
xdrawchem
|
- bump all port that indirectly depends on libjpeg and have not yet been bumped or updated
|
2009-07-31 13:57:52 +00:00 |
|
xmolwt
|
|
|
|
Makefile
|
Bio::SCF module allows you to read and update (in a restricted
|
2009-08-28 23:36:09 +00:00 |
