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16 Commits

Author SHA1 Message Date
Emanuel Haupt
1f6893241a Support staging 2014-02-16 11:42:09 +00:00
Baptiste Daroussin
7055ff02f1 Add NO_STAGE all over the place in preparation for the staging support (cat: biology) 2013-09-20 15:55:44 +00:00
Boris Samorodov
747a2e993f Remove stale (since r321246) pkg-plist file. 2013-06-19 21:04:36 +00:00
Boris Samorodov
f0b8908924 Index: Makefile 
===================================================================
--- Makefile	(revision 321238)
+++ Makefile	(working copy)
@@ -1,9 +1,5 @@
-# New ports collection makefile for:	seqio
-# Date created:				17 August 2001
-# Whom:					Tony Maher
-#
+# Created by: Tony Maher
 # $FreeBSD$
-#

 PORTNAME=	seqio
 PORTVERSION=	1.2.2
@@ -13,38 +9,32 @@
 DISTNAME=	${PORTNAME}

 MAINTAINER=	ports@FreeBSD.org
-COMMENT=	A set of C functions which can read/write biological sequence files
+COMMENT=	Set of C functions which can read/write biological sequence files

 WRKSRC=		${WRKDIR}/${PORTNAME}-${PORTVERSION}

 EXAMPLES=	example1.c example2.c example3.c example4.c seqio.c \
 		seqio.h Makefile
 PROGRAMS=	fmtseq grepseq idxseq typeseq wcseq
+PLIST_FILES+=	${PROGRAMS:S,^,bin/,}
+PORTEXAMPLES=	*
+PORTDOCS=	*

+OPTIONS_DEFINE=	DOCS EXAMPLES
+
+.include <bsd.port.options.mk>
+
 do-install:
-	cd ${WRKSRC}; \
-	for file in ${PROGRAMS}; do \
-		${INSTALL_PROGRAM} $$file ${PREFIX}/bin; \
-	done
-.if !defined(NOPORTEXAMPLES)
-	${MKDIR} ${EXAMPLESDIR}
-	cd ${WRKSRC}; \
-	for file in ${EXAMPLES}; do \
-		${INSTALL_DATA} $$file ${EXAMPLESDIR}; \
-	done
+	${INSTALL_PROGRAM} ${PROGRAMS:S,^,${WRKSRC}/,} ${PREFIX}/bin
+.if ${PORT_OPTIONS:MEXAMPLES}
+	@${MKDIR} ${EXAMPLESDIR}
+	${INSTALL_DATA} ${EXAMPLES:S,^,${WRKSRC}/,} ${EXAMPLESDIR}
 .endif
-.if !defined(NOPORTDOCS)
-	${MKDIR} ${DOCSDIR}
-	${MKDIR} ${DOCSDIR}/html
+.if ${PORT_OPTIONS:MDOCS}
+	@${MKDIR} ${DOCSDIR}/html
 	${INSTALL_DATA} ${WRKSRC}/bioseq.txt ${DOCSDIR}
-	cd ${WRKSRC}/doc; \
-	for file in *.doc; do \
-		${INSTALL_DATA} $$file ${DOCSDIR}; \
-	done
-	cd ${WRKSRC}/html; \
-	for file in *.html; do \
-		${INSTALL_DATA} $$file ${DOCSDIR}/html; \
-	done
+	${INSTALL_DATA} ${WRKSRC}/doc/*.doc ${DOCSDIR}
+	${INSTALL_DATA} ${WRKSRC}/html/*.html ${DOCSDIR}/html
 .endif

 .include <bsd.port.mk>
 2013-06-19 13:09:19 +00:00
Martin Wilke
a9481afc8a - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
Doug Barton
2fadfa2cfb For ports maintained by ports@FreeBSD.org, remove names and/or 
e-mail addresses from the pkg-descr file that could reasonably
be mistaken for maintainer contact information in order to avoid
confusion on the part of users looking for support. As a pleasant
side effect this also avoids confusion and/or frustration for people
who are no longer maintaining those ports.
 2009-12-21 02:19:12 +00:00
Ion-Mihai Tetcu
30eddc16be - respect NOPORTEXAMPLES/NOPORTDOCS and fix plist 
- bump PORTREVISION

Prompted by:	QA Tindy run
 2008-07-12 06:28:25 +00:00
Mark Linimon
5977ae11ec Reset tonymaher@optusnet.com.au due to maintainer-timeouts and no response 
to email.

Hat:		portmgr
 2006-12-26 12:46:34 +00:00
Edwin Groothuis
acd87b4ad8 SHA256ify 
Approved by:    krion@
 2006-01-22 08:34:46 +00:00
Edwin Groothuis
8a256d14e0 Fix maintainer address 
From: Tony Maher <anthony.maher@uts.edu.au>
    To: Edwin Groothuis <edwin@FreeBSD.org>
    Subject: Re: ports/91537: maths/xgobi - download site moved/maintainer addressupdate

    Actually I need  modify all my ports to use OptusNet rather than
    Biolateral.  Is there an easy way to do this or should I submit a
    separate 1-line patch and PR for each port?

    biology/crimap
    biology/dna-qc
    biology/flip
    biology/primer3
    biology/seqio
    biology/wise
    math/xgobi
    net/generic-nqs

Submitted by:	Tony Maher <anthony.maher@uts.edu.au>
 2006-01-09 03:25:03 +00:00
Trevor Johnson
8232e82f85 SIZEify (maintainer timeout) 2004-03-31 03:12:58 +00:00
Kris Kennaway
d4788043a6 Respect CC and CFLAGS 2003-10-23 00:01:04 +00:00
Sergey A. Osokin
958842c5c6 Cosmetic fix: use %%DOCSDIR%% macro. 
No functionally changes.

Submitted by:	Oleg Karachevtsev <ok@etrust.ru>
A part of PR:	57992
 2003-10-22 09:37:18 +00:00
Akinori MUSHA
57f9198bc7 De-pkg-comment. 2003-02-21 11:08:38 +00:00
Akinori MUSHA
912498462e Remove a redundant trailing space. 2001-10-21 07:55:45 +00:00
Johann Visagie
8aff3a669c Add seqio 1.2.2, a set of C functions which can read/write 
biological sequence files.

PR:		29922
Submitted by:	Tony Maher <tonym@biolateral.com.au>
 2001-08-22 12:07:26 +00:00