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math/R-cran-XLConnect: adding a R package for manipulating Microsoft Excel files

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This commit is contained in:
Thierry Thomas 2022-04-29 15:02:26 +02:00
parent 196c587458
commit e4fcc03cae
6 changed files with 227 additions and 0 deletions
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1
math/Makefile
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@ -33,6 +33,7 @@
SUBDIR += R-cran-SQUAREM
SUBDIR += R-cran-SparseM
SUBDIR += R-cran-VGAM
SUBDIR += R-cran-XLConnect
SUBDIR += R-cran-Zelig
SUBDIR += R-cran-acepack
SUBDIR += R-cran-alabama

37
math/R-cran-XLConnect/Makefile Normal file
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@ -0,0 +1,37 @@
# Created by: Thierry Thomas <thierry@pompo.net>
PORTNAME= XLConnect
PORTVERSION= 1.0.5
CATEGORIES= math
DISTNAME= ${PORTNAME}_${PORTVERSION}
MAINTAINER= thierry@FreeBSD.org
COMMENT= R package for manipulating Microsoft Excel files
LICENSE= GPLv3
BUILD_DEPENDS= R-cran-rJava>0:devel/R-cran-rJava
RUN_DEPENDS= R-cran-rJava>0:devel/R-cran-rJava \
apache-poi>0:textproc/apache-poi \
SparseBitSet>0:devel/sparsebitset \
apache-xmlbeans>0:textproc/apache-xmlbeans \
apache-commons-math>0:math/apache-commons-math \
apache-commons-codec>0:java/apache-commons-codec \
apache-commons-compress>0:archivers/apache-commons-compress \
apache-commons-collections4>0:java/apache-commons-collections4
USES= cran
USE_JAVA= yes
DEP_JARS= commons-codec commons-collections4 commons-compress \
ooxml-schemas poi poi-ooxml poi-ooxml-schemas \
SparseBitSet xmlbeans
post-install:
.for j in ${DEP_JARS}
${LN} -sf ${JAVALIBDIR}/${j}.jar ${STAGEDIR}${PREFIX}/${R_MOD_DIR}/java/
.endfor
${LN} -sf ${JAVALIBDIR}/commons-math.jar \
${STAGEDIR}${PREFIX}/${R_MOD_DIR}/java/commons-math3.jar
.include <bsd.port.mk>

3
math/R-cran-XLConnect/distinfo Normal file
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@ -0,0 +1,3 @@
TIMESTAMP = 1651219653
SHA256 (XLConnect_1.0.5.tar.gz) = 975c2ef57f28ccfac79ae5d285b7e82e60791fb121052616c10bc52e2bca16ad
SIZE (XLConnect_1.0.5.tar.gz) = 1406818

48
math/R-cran-XLConnect/files/patch-R_onLoad.R Normal file
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@ -0,0 +1,48 @@
--- R/onLoad.R.orig 2021-09-30 08:28:06 UTC
+++ R/onLoad.R
@@ -54,44 +54,7 @@
repo <- "https://repo1.maven.org/maven2"
}
apachePrefix <- paste0(repo, "/org/apache")
- sharedPaths <- tryCatch({
- c(
- xlcEnsureDependenciesFor(
- paste0(apachePrefix, "/poi/poi-ooxml-schemas/4.1.2/poi-ooxml-schemas-4.1.2.jar"), "poi-ooxml-schemas.jar",
- "4\\.[1-9].*", libname, pkgname, debianpkg = "libapache-poi-java", rpmpkg="apache-poi"),
- xlcEnsureDependenciesFor(
- paste0(apachePrefix, "/poi/poi-ooxml/4.1.2/poi-ooxml-4.1.2.jar"), "poi-ooxml.jar",
- "4\\.[1-9].*", libname, pkgname, debianpkg = "libapache-poi-java", rpmpkg="apache-poi"),
- xlcEnsureDependenciesFor(
- paste0(apachePrefix, "/poi/poi/4.1.2/poi-4.1.2.jar"), "poi.jar",
- "4\\.[1-9].*", libname, pkgname, debianpkg = "libapache-poi-java", rpmpkg="apache-poi"),
- xlcEnsureDependenciesFor(
- paste0(apachePrefix, "/commons/commons-compress/1.20/commons-compress-1.20.jar"), "commons-compress.jar",
- "1\\.(1[8-9]|[2-9][0-9]).*", libname, pkgname, debianpkg = "libcommons-compress-java", rpmpkg="apache-commons-compress"),
- xlcEnsureDependenciesFor(
- paste0(apachePrefix, "/xmlbeans/xmlbeans/3.1.0/xmlbeans-3.1.0.jar"), "xmlbeans.jar",
- "3\\..*", libname, pkgname, debianpkg="libxmlbeans-java"),
- xlcEnsureDependenciesFor(
- paste0(apachePrefix, "/commons/commons-collections4/4.4/commons-collections4-4.4.jar"), "commons-collections4.jar",
- "4-4\\.([2-9]|1[0-9]).*", libname, pkgname, debianpkg="libcommons-collections4-java", rpmpkg="apache-commons-collections4"),
- xlcEnsureDependenciesFor(
- paste0(apachePrefix, "/commons/commons-math3/3.6.1/commons-math3-3.6.1.jar"), "commons-math3.jar",
- "3\\.([6-9]|1[0-9]).*", libname, pkgname, debianpkg="libcommons-math3-java"),
- xlcEnsureDependenciesFor(
- paste0(repo, "/commons-codec/commons-codec/1.15/commons-codec-1.15.jar"), "commons-codec-1.15.jar",
- "1\\.(1[1-9]|[2-9][0-9]).*", libname, pkgname, debianpkg="libcommons-codec-java", rpmpkg="apache-commons-codec"),
- xlcEnsureDependenciesFor(
- paste0(apachePrefix, "/poi/ooxml-schemas/1.4/ooxml-schemas-1.4.jar"), "ooxml-schemas.jar",
- "1\\.([4-9]|[1-9][0-9]).*", libname, pkgname),
- xlcEnsureDependenciesFor(
- paste0(repo, "/com/zaxxer/SparseBitSet/1.2/SparseBitSet-1.2.jar"), "SparseBitSet.jar",
- "1\\.([2-9]|[1-9][0-9]).*", libname, pkgname)
- )
- },
- error=function(e) {
- e
- }
- )
+ sharedPaths <- ""
.jpackage(name = pkgname, jars = "*", morePaths = sharedPaths)
# Perform general XLConnect settings - pass package description
XLConnectSettings(packageDescription(pkgname))

5
math/R-cran-XLConnect/pkg-descr Normal file
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@ -0,0 +1,5 @@
XLConnect is a comprehensive and cross-platform R package for manipulating
Microsoft Excel files from within R.
WWW: https://cran.r-project.org/package=XLConnect
WWW: https://github.com/miraisolutions/xlconnect

133
math/R-cran-XLConnect/pkg-plist Normal file
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@ -0,0 +1,133 @@
%%R_MOD_DIR%%/COPYRIGHTS
%%R_MOD_DIR%%/DESCRIPTION
%%R_MOD_DIR%%/INDEX
%%R_MOD_DIR%%/Meta/Rd.rds
%%R_MOD_DIR%%/Meta/data.rds
%%R_MOD_DIR%%/Meta/demo.rds
%%R_MOD_DIR%%/Meta/features.rds
%%R_MOD_DIR%%/Meta/hsearch.rds
%%R_MOD_DIR%%/Meta/links.rds
%%R_MOD_DIR%%/Meta/nsInfo.rds
%%R_MOD_DIR%%/Meta/package.rds
%%R_MOD_DIR%%/Meta/vignette.rds
%%R_MOD_DIR%%/NAMESPACE
%%R_MOD_DIR%%/NEWS
%%R_MOD_DIR%%/R/XLConnect
%%R_MOD_DIR%%/R/XLConnect.rdb
%%R_MOD_DIR%%/R/XLConnect.rdx
%%R_MOD_DIR%%/XLConnect.R
%%R_MOD_DIR%%/data/Rdata.rdb
%%R_MOD_DIR%%/data/Rdata.rds
%%R_MOD_DIR%%/data/Rdata.rdx
%%R_MOD_DIR%%/demo/addImage.R
%%R_MOD_DIR%%/demo/cellsize.R
%%R_MOD_DIR%%/demo/cellstyles1.R
%%R_MOD_DIR%%/demo/cellstyles2.R
%%R_MOD_DIR%%/demo/cellstyles3.R
%%R_MOD_DIR%%/demo/dataformat.R
%%R_MOD_DIR%%/demo/hideSheets.R
%%R_MOD_DIR%%/demo/readNamedRegion.R
%%R_MOD_DIR%%/demo/readWorksheet.R
%%R_MOD_DIR%%/demo/summary.R
%%R_MOD_DIR%%/demo/withWorkbook.R
%%R_MOD_DIR%%/demo/writeLargeData.R
%%R_MOD_DIR%%/demo/writeNamedRegion.R
%%R_MOD_DIR%%/demo/writeWorksheet.R
%%R_MOD_DIR%%/demoFiles/SwitzerlandFlag.jpg
%%R_MOD_DIR%%/demoFiles/conversion.xlsx
%%R_MOD_DIR%%/demoFiles/errorCell.xlsx
%%R_MOD_DIR%%/demoFiles/mtcars.xlsx
%%R_MOD_DIR%%/demoFiles/multiregion.xls
%%R_MOD_DIR%%/demoFiles/multiregion.xlsx
%%R_MOD_DIR%%/demoFiles/mydata.xlsx
%%R_MOD_DIR%%/demoFiles/template.xlsx
%%R_MOD_DIR%%/demoFiles/template2.xlsx
%%R_MOD_DIR%%/doc/XLConnect.R
%%R_MOD_DIR%%/doc/XLConnect.Rnw
%%R_MOD_DIR%%/doc/XLConnect.pdf
%%R_MOD_DIR%%/doc/XLConnectImpatient.Rnw
%%R_MOD_DIR%%/doc/XLConnectImpatient.pdf
%%R_MOD_DIR%%/doc/index.html
%%R_MOD_DIR%%/help/AnIndex
%%R_MOD_DIR%%/help/XLConnect.rdb
%%R_MOD_DIR%%/help/XLConnect.rdx
%%R_MOD_DIR%%/help/aliases.rds
%%R_MOD_DIR%%/help/figures/logo.png
%%R_MOD_DIR%%/help/paths.rds
%%R_MOD_DIR%%/html/00Index.html
%%R_MOD_DIR%%/html/R.css
%%R_MOD_DIR%%/java/SparseBitSet.jar
%%R_MOD_DIR%%/java/XLConnect-1.0.3.jar
%%R_MOD_DIR%%/java/commons-codec.jar
%%R_MOD_DIR%%/java/commons-collections4.jar
%%R_MOD_DIR%%/java/commons-compress.jar
%%R_MOD_DIR%%/java/commons-math3.jar
%%R_MOD_DIR%%/java/curvesapi-1.06.jar
%%R_MOD_DIR%%/java/ooxml-schemas.jar
%%R_MOD_DIR%%/java/poi-ooxml-schemas.jar
%%R_MOD_DIR%%/java/poi-ooxml.jar
%%R_MOD_DIR%%/java/poi.jar
%%R_MOD_DIR%%/java/xmlbeans.jar
%%R_MOD_DIR%%/tests/run_tests.R
%%R_MOD_DIR%%/unitTests/resources/testBug106.xlsx
%%R_MOD_DIR%%/unitTests/resources/testBug49.xlsx
%%R_MOD_DIR%%/unitTests/resources/testBug52.xlsx
%%R_MOD_DIR%%/unitTests/resources/testBug53.xlsx
%%R_MOD_DIR%%/unitTests/resources/testBug61.xlsx
%%R_MOD_DIR%%/unitTests/resources/testCachedValues.xls
%%R_MOD_DIR%%/unitTests/resources/testCachedValues.xlsx
%%R_MOD_DIR%%/unitTests/resources/testLoadWorkbook.xls
%%R_MOD_DIR%%/unitTests/resources/testLoadWorkbook.xlsx
%%R_MOD_DIR%%/unitTests/resources/testReadWorksheetSparseBitSet.xlsx
%%R_MOD_DIR%%/unitTests/resources/testWithWorkbook.xls
%%R_MOD_DIR%%/unitTests/resources/testWithWorkbook.xlsx
%%R_MOD_DIR%%/unitTests/resources/testWorkbookCellFormula.xls
%%R_MOD_DIR%%/unitTests/resources/testWorkbookCellFormula.xlsx
%%R_MOD_DIR%%/unitTests/resources/testWorkbookDefinedNames.xls
%%R_MOD_DIR%%/unitTests/resources/testWorkbookDefinedNames.xlsx
%%R_MOD_DIR%%/unitTests/resources/testWorkbookErrorCell.xls
%%R_MOD_DIR%%/unitTests/resources/testWorkbookErrorCell.xlsx
%%R_MOD_DIR%%/unitTests/resources/testWorkbookExistsNameAndSheet.xls
%%R_MOD_DIR%%/unitTests/resources/testWorkbookExistsNameAndSheet.xlsx
%%R_MOD_DIR%%/unitTests/resources/testWorkbookForceRecalc.xls
%%R_MOD_DIR%%/unitTests/resources/testWorkbookForceRecalc.xlsx
%%R_MOD_DIR%%/unitTests/resources/testWorkbookMissingValue.xls
%%R_MOD_DIR%%/unitTests/resources/testWorkbookMissingValue.xlsx
%%R_MOD_DIR%%/unitTests/resources/testWorkbookReadNamedRegion.xls
%%R_MOD_DIR%%/unitTests/resources/testWorkbookReadNamedRegion.xlsx
%%R_MOD_DIR%%/unitTests/resources/testWorkbookReadWorksheet.xls
%%R_MOD_DIR%%/unitTests/resources/testWorkbookReadWorksheet.xlsx
%%R_MOD_DIR%%/unitTests/resources/testWorkbookSheets.xls
%%R_MOD_DIR%%/unitTests/resources/testWorkbookSheets.xlsx
%%R_MOD_DIR%%/unitTests/runit.arefidx.R
%%R_MOD_DIR%%/unitTests/runit.colidx.R
%%R_MOD_DIR%%/unitTests/runit.crefidx.R
%%R_MOD_DIR%%/unitTests/runit.dataframeConversion.R
%%R_MOD_DIR%%/unitTests/runit.dumpAndRestore.R
%%R_MOD_DIR%%/unitTests/runit.extractSheetName.R
%%R_MOD_DIR%%/unitTests/runit.loadWorkbook.R
%%R_MOD_DIR%%/unitTests/runit.with.workbook.R
%%R_MOD_DIR%%/unitTests/runit.workbook.cellstyles.R
%%R_MOD_DIR%%/unitTests/runit.workbook.createName.R
%%R_MOD_DIR%%/unitTests/runit.workbook.createSheet.R
%%R_MOD_DIR%%/unitTests/runit.workbook.existsName.R
%%R_MOD_DIR%%/unitTests/runit.workbook.existsSheet.R
%%R_MOD_DIR%%/unitTests/runit.workbook.extraction.R
%%R_MOD_DIR%%/unitTests/runit.workbook.getBoundingBox.R
%%R_MOD_DIR%%/unitTests/runit.workbook.getDefinedNames.R
%%R_MOD_DIR%%/unitTests/runit.workbook.getSheetPos.R
%%R_MOD_DIR%%/unitTests/runit.workbook.getSheets.R
%%R_MOD_DIR%%/unitTests/runit.workbook.hideSheet.R
%%R_MOD_DIR%%/unitTests/runit.workbook.onErrorCell.R
%%R_MOD_DIR%%/unitTests/runit.workbook.readNamedRegion.R
%%R_MOD_DIR%%/unitTests/runit.workbook.readWorksheet.R
%%R_MOD_DIR%%/unitTests/runit.workbook.renameSheet.R
%%R_MOD_DIR%%/unitTests/runit.workbook.saveWorkbook.R
%%R_MOD_DIR%%/unitTests/runit.workbook.setMissingValue.R
%%R_MOD_DIR%%/unitTests/runit.workbook.setSheetPos.R
%%R_MOD_DIR%%/unitTests/runit.workbook.writeNamedRegion.R
%%R_MOD_DIR%%/unitTests/runit.workbook.writeWorksheet.R
%%R_MOD_DIR%%/unitTests/runit.writeAndReadNamedRegion.R
%%R_MOD_DIR%%/unitTests/runit.writeAndReadWorksheet.R
%%R_MOD_DIR%%/unitTests/runit.writeNamedRegionToFile.R
%%R_MOD_DIR%%/unitTests/runit.writeWorksheetToFile.R