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biologi/ncbi-toolkit: Remove dependency on libXp

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Remove the dependency on libXp from ncbi-toolkit, since libXp is deprecated
and it isn't needed.
Remove deprecation from ncbi-toolkit.
This commit is contained in:
Niclas Zeising 2019-09-28 10:52:57 +00:00
parent 4df5b7bc2d
commit dcb57b7643
Notes: svn2git 2021-03-31 03:12:20 +00:00 
svn path=/head/; revision=513114
1 changed files with 4 additions and 5 deletions
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9
biology/ncbi-toolkit/Makefile
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@ -3,7 +3,7 @@
PORTNAME= ncbi-toolkit
DISTVERSION= 2017.01.06 # containing BLAST v2.2.27 (? is this true)
PORTREVISION= 3
PORTREVISION= 4
CATEGORIES= biology
MASTER_SITES= ftp://ftp.ncbi.nlm.nih.gov/toolbox/ncbi_tools/old/${PORTVERSION:S/.//g}/
DISTNAME= ncbi
@ -12,8 +12,6 @@ DIST_SUBDIR= ${PORTNAME}-${PORTVERSION}
MAINTAINER= yuri@FreeBSD.org
COMMENT= NCBI development toolkit, including BLAST 2 and GenBank/Entrez support
DEPRECATED= Depends on deprecated libXp
LIB_DEPENDS= libfontconfig.so:x11-fonts/fontconfig \
libgmp.so:math/gmp \
libgnutls.so:security/gnutls \
@ -24,8 +22,7 @@ LIB_DEPENDS= libfontconfig.so:x11-fonts/fontconfig \
libpng.so:graphics/png \
libtasn1.so:security/libtasn1 \
libtspi.so:security/trousers \
libunistring.so:devel/libunistring \
libXp.so:x11/libXp
libunistring.so:devel/libunistring
USES= gettext-runtime iconv jpeg motif xorg
USE_XORG= x11 xau xext xft xmu xrender xt
@ -41,6 +38,8 @@ post-patch:
'/^NCBI_CC/s|=.*|= ${CC}| ; \
/^NCBI_LDFLGS1/s|=.*|= ${LDFLAGS}| ; \
/^NCBI_OPTFLAG/s|= .*|= ${CFLAGS}| ; \
/^NCBI_VIBLIBS/s|-lXp\ || ; \
/^NCBI_DISTVIBLIBS/s|-lXp\ || ; \
s|-I/usr/X11R6/include||g ; \
s|-L/usr/X11R6/lib||g ; \
s|/usr/local|${LOCALBASE}|g ; \