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biology/viennarna: Update 2.4.16 -> 2.4.17

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This commit is contained in:
Yuri Victorovich 2020-12-06 20:14:53 +00:00
parent c2c7f60263
commit d47e2761a4
Notes: svn2git 2021-03-31 03:12:20 +00:00 
svn path=/head/; revision=557171
4 changed files with 6 additions and 17 deletions
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2
biology/viennarna/Makefile
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@ -1,7 +1,7 @@
# $FreeBSD$
PORTNAME= viennarna
DISTVERSION= 2.4.16
DISTVERSION= 2.4.17
CATEGORIES= biology
MASTER_SITES= https://www.tbi.univie.ac.at/RNA/download/sourcecode/2_4_x/
DISTNAME= ViennaRNA-${DISTVERSION}

6
biology/viennarna/distinfo
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@ -1,3 +1,3 @@
TIMESTAMP = 1605136528
SHA256 (ViennaRNA-2.4.16.tar.gz) = 4544211cf54d21a005256119aeee5db38b07bef8f7755711aca88d2f84d26f62
SIZE (ViennaRNA-2.4.16.tar.gz) = 38820696
TIMESTAMP = 1607284784
SHA256 (ViennaRNA-2.4.17.tar.gz) = b1e608f6f37cdf4adbcdd1f86fd9ebfcc1e663d58488e0f8173a58879480c121
SIZE (ViennaRNA-2.4.17.tar.gz) = 34680460

13
biology/viennarna/files/patch-src_bin_Makefile.in
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@ -1,13 +0,0 @@
--- src/bin/Makefile.in.orig 2019-06-24 04:33:32 UTC
+++ src/bin/Makefile.in
@@ -104,8 +104,8 @@ bin_PROGRAMS = RNAfold$(EXEEXT) RNAeval$(EXEEXT) RNAhe
RNAparconv$(EXEEXT) RNAPKplex$(EXEEXT) RNAplex$(EXEEXT) \
RNAsnoop$(EXEEXT) RNApvmin$(EXEEXT)
@VRNA_AM_SWITCH_MPFR_TRUE@am__append_4 = $(MPFR_LIBS)
-@VRNA_AM_SWITCH_SVM_TRUE@am__append_5 = -lstdc++
-@VRNA_AM_SWITCH_SVM_TRUE@am__append_6 = -lstdc++
+@VRNA_AM_SWITCH_SVM_TRUE@am__append_5 = -lc++
+@VRNA_AM_SWITCH_SVM_TRUE@am__append_6 = -lc++
subdir = src/bin
ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
am__aclocal_m4_deps = $(top_srcdir)/m4/ac_rna.m4 \

2
biology/viennarna/pkg-plist
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@ -88,6 +88,7 @@ include/ViennaRNA/fold_vars.h
include/ViennaRNA/gquad.h
include/ViennaRNA/grammar.h
include/ViennaRNA/hairpin_loops.h
include/ViennaRNA/heat_capacity.h
include/ViennaRNA/interior_loops.h
include/ViennaRNA/inverse.h
include/ViennaRNA/io/file_formats.h
@ -167,6 +168,7 @@ include/ViennaRNA/utils/svm.h
include/ViennaRNA/utils/units.h
include/ViennaRNA/vrna_config.h
include/ViennaRNA/walk.h
include/ViennaRNA/zscore.h
include/g2.h
include/g2_FIG.h
include/g2_PS.h