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New port: science/mmdb2: C++ toolkit for working with macromolecular coordinate files

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This commit is contained in:
Yuri Victorovich 2018-07-07 23:32:57 +00:00
parent 82ac55cbf5
commit b998881658
Notes: svn2git 2021-03-31 03:12:20 +00:00 
svn path=/head/; revision=474143
5 changed files with 78 additions and 0 deletions
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1
science/Makefile
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@ -115,6 +115,7 @@
SUBDIR += metaf2xml
SUBDIR += metaphysicl
SUBDIR += minc2
SUBDIR += mmdb2
SUBDIR += mol2ps
SUBDIR += mpb
SUBDIR += mpqc

21
science/mmdb2/Makefile Normal file
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@ -0,0 +1,21 @@
# $FreeBSD$
PORTNAME= mmdb2
DISTVERSION= 2.0.12
CATEGORIES= science
MASTER_SITES= https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/dependencies/
MAINTAINER= yuri@FreeBSD.org
COMMENT= C++ toolkit for working with macromolecular coordinate files
LICENSE= GPLv3 LGPL3
LICENSE_COMB= dual
LICENSE_FILE_GPLv3= ${WRKSRC}/COPYING
LICENSE_FILE_LGPL3= ${WRKSRC}/COPYING.LESSER
USES= gmake libtool
GNU_CONFIGURE= yes
CONFIGURE_ARGS= --enable-shared --disable-static
USE_LDCONFIG= yes
.include <bsd.port.mk>

3
science/mmdb2/distinfo Normal file
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@ -0,0 +1,3 @@
TIMESTAMP = 1531005594
SHA256 (mmdb2-2.0.12.tar.gz) = a24fca06266c6b4db06ad1e0e0ddf5037f2ea624347ab119a6b163d8929c62a0
SIZE (mmdb2-2.0.12.tar.gz) = 723975

15
science/mmdb2/pkg-descr Normal file
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@ -0,0 +1,15 @@
MMDB is designed to assist developers in working with macromolecular coordinate
files. The library handles both PDB and mmCIF format files.
The Library also features an internal binary format, portable between different
platforms. This is achieved at uniformity of the Library's interface functions,
so that there is no difference in handling different formats.
MMDB provides various high-level tools for working with coordinate files,
including reading and writing, orthogonal-fractional transforms, generation of
symmetry mates, editing the molecular structure and more.
MMDB is written by Eugene Krissinel, and is distributed as a part of the CCP4
suite. This project maintains a current stand-alone version of the library.
WWW: https://launchpad.net/mmd

38
science/mmdb2/pkg-plist Normal file
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include/mmdb2/hybrid_36.h
include/mmdb2/mmdb_atom.h
include/mmdb2/mmdb_bondmngr.h
include/mmdb2/mmdb_chain.h
include/mmdb2/mmdb_cifdefs.h
include/mmdb2/mmdb_coormngr.h
include/mmdb2/mmdb_cryst.h
include/mmdb2/mmdb_defs.h
include/mmdb2/mmdb_ficif.h
include/mmdb2/mmdb_io_file.h
include/mmdb2/mmdb_io_stream.h
include/mmdb2/mmdb_machine_.h
include/mmdb2/mmdb_manager.h
include/mmdb2/mmdb_mask.h
include/mmdb2/mmdb_math_.h
include/mmdb2/mmdb_math_align.h
include/mmdb2/mmdb_math_bfgsmin.h
include/mmdb2/mmdb_math_fft.h
include/mmdb2/mmdb_math_graph.h
include/mmdb2/mmdb_math_linalg.h
include/mmdb2/mmdb_math_rand.h
include/mmdb2/mmdb_mattype.h
include/mmdb2/mmdb_mmcif_.h
include/mmdb2/mmdb_model.h
include/mmdb2/mmdb_root.h
include/mmdb2/mmdb_rwbrook.h
include/mmdb2/mmdb_selmngr.h
include/mmdb2/mmdb_seqsuperpose.h
include/mmdb2/mmdb_symop.h
include/mmdb2/mmdb_tables.h
include/mmdb2/mmdb_title.h
include/mmdb2/mmdb_uddata.h
include/mmdb2/mmdb_utils.h
include/mmdb2/mmdb_xml_.h
lib/libmmdb2.so
lib/libmmdb2.so.0
lib/libmmdb2.so.0.0.0
libdata/pkgconfig/mmdb2.pc