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biology/py-cutadapt: Upgrade to 2.7

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Numerous minor fixes and enhancements.
Upstreamed setup.py patches for dependency versions.

Reported by:    portscout
This commit is contained in:
Jason W. Bacon 2019-11-23 14:45:53 +00:00
parent 0082d717fc
commit b6b56692de
Notes: svn2git 2021-03-31 03:12:20 +00:00 
svn path=/head/; revision=518242
2 changed files with 7 additions and 8 deletions
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9
biology/py-cutadapt/Makefile
View File

@ -1,7 +1,7 @@
# $FreeBSD$
PORTNAME= cutadapt
DISTVERSION= 2.5
DISTVERSION= 2.7
CATEGORIES= biology python
MASTER_SITES= CHEESESHOP
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@ -13,13 +13,12 @@ LICENSE= MIT
LICENSE_FILE= ${WRKSRC}/LICENSE
BUILD_DEPENDS= ${PYTHON_PKGNAMEPREFIX}setuptools_scm>0:devel/py-setuptools_scm@${PY_FLAVOR}
RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}xopen>=0.5.0:archivers/py-xopen@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}dnaio>=0.3:biology/py-dnaio@${PY_FLAVOR} \
pigz>=0:archivers/pigz
RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}xopen>=0.8.4:archivers/py-xopen@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}dnaio>=0.4.1:biology/py-dnaio@${PY_FLAVOR}
TEST_DEPENDS= ${PYTHON_PKGNAMEPREFIX}pytest>0:devel/py-pytest@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}pytest-timeout>0:devel/py-pytest-timeout@${PY_FLAVOR}
USES= python:3.4+
USES= python:3.5+
USE_PYTHON= autoplist concurrent cython distutils
post-install:

6
biology/py-cutadapt/distinfo
View File

@ -1,3 +1,3 @@
TIMESTAMP = 1568342520
SHA256 (cutadapt-2.5.tar.gz) = ced79e49b93e922e579d0bb9d21298dcb2d7b7b1ea721feed484277e08b1660b
SIZE (cutadapt-2.5.tar.gz) = 269321
TIMESTAMP = 1574517013
SHA256 (cutadapt-2.7.tar.gz) = 070dec8d94b8bda72906c614b9e71bd61254a67a176dd17e5b57671edd567983
SIZE (cutadapt-2.7.tar.gz) = 272702