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- Add science/orthanc 

Orthanc aims at providing a simple, yet powerful standalone DICOM
server. It is designed to improve the DICOM flows in hospitals and to
support research about the automated analysis of medical images.

Orthanc can turn any computer running Windows, Linux, FreeBSD or OS X
into a DICOM store (in other words, a mini-PACS system). Its
architecture is lightweight and standalone, meaning that no complex
database administration is required, nor the installation of third-party
dependencies.

What makes Orthanc unique is the fact that it provides a RESTful API.
Thanks to this major feature, it is possible to drive Orthanc from any
computer language. The DICOM tags of the stored medical images can be
downloaded in the JSON file format. Furthermore, standard PNG images can
be generated on-the-fly from the DICOM instances by Orthanc.

Orthanc lets its users focus on the content of the DICOM files, hiding
the complexity of the DICOM format and of the DICOM protocol.

WWW: http://www.orthanc-server.com/

PR:		199146
Submitted by:	mp39590@gmail.com
This commit is contained in:
Dmitry Marakasov 2015-06-04 14:07:31 +00:00
parent 7f466581c4
commit adf952100f
Notes: svn2git 2021-03-31 03:12:20 +00:00 
svn path=/head/; revision=388534
22 changed files with 444 additions and 0 deletions
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1
GIDs
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@ -159,6 +159,7 @@ backuppc:*:300:
_sphinx:*:312:
dkfilter:*:325:
smfs:*:326:
orthanc:*:330:
daapd:*:337:
murmur:*:338:
wildfire:*:340:

1
UIDs
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@ -165,6 +165,7 @@ backuppc:*:300:300::0:0:BackupPC pseudo-user:/nonexistent:/usr/sbin/nologin
_sphinx:*:312:312::0:0:Sphinxsearch Owner:/nonexistent:/usr/sbin/nologin
dkfilter:*:325:325::0:0:DK Filter Owner:/nonexistent:/usr/sbin/nologin
smfs:*:326:326::0:0:SMFSAV Owner:/nonexistent:/usr/sbin/nologin
orthanc:*:330:330::0:0:Orthanc Daemon:/nonexistent:/usr/sbin/nologin
_pma:*:336:80::0:0:phpMyAdmin Owner:/nonexistent:/usr/sbin/nologin
daapd:*:337:337::0:0:daapd User:/nonexistent:/usr/sbin/nologin
murmur:*:338:338::0:0:& User:/nonexistent:/usr/sbin/nologin

1
science/Makefile
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@ -97,6 +97,7 @@
SUBDIR += nifticlib
SUBDIR += openbabel
SUBDIR += openkim
SUBDIR += orthanc
SUBDIR += p5-Algorithm-SVMLight
SUBDIR += p5-Chemistry-3DBuilder
SUBDIR += p5-Chemistry-Bond-Find

63
science/orthanc/Makefile Normal file
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@ -0,0 +1,63 @@
# Created by: mp39590@gmail.com
# $FreeBSD$
PORTNAME= orthanc
PORTVERSION= 0.8.6
CATEGORIES= science graphics net
MASTER_SITES= SF/orthancserver/:main \
http://www.montefiore.ulg.ac.be/~jodogne/Orthanc/ThirdPartyDownloads/:mongoose
DISTFILES= Orthanc-${PORTVERSION}.tar.gz:main \
mongoose-3.8.tgz:mongoose
DIST_SUBDIR= ${PORTNAME}
MAINTAINER= mp39590@gmail.com
COMMENT= RESTful DICOM server for healthcare and medical research
LICENSE= GPLv3
LICENSE_FILE= ${WRKSRC}/COPYING
LIB_DEPENDS= libcurl.so:${PORTSDIR}/ftp/curl \
libjsoncpp.so:${PORTSDIR}/devel/jsoncpp \
libuuid.so:${PORTSDIR}/misc/e2fsprogs-libuuid \
libglog.so:${PORTSDIR}/devel/glog \
libboost_filesystem.so:${PORTSDIR}/devel/boost-libs \
libdcmimage.so:${PORTSDIR}/devel/dcmtk \
libsqlite3.so:${PORTSDIR}/databases/sqlite3 \
libpugixml.so:${PORTSDIR}/textproc/pugixml
CMAKE_ARGS= -DDCMTK_LIBRARIES="dcmdsig;charls;dcmjpls" \
-DDCMTK_DICTIONARY_DIR="${LOCALBASE}/share/dcmtk" \
-DUSE_SYSTEM_MONGOOSE=OFF \
-DBUILD_UNIT_TESTS=OFF
USES= cmake:outsource python:build lua:51 dos2unix
DOS2UNIX_FILES= CMakeLists.txt
CFLAGS+= -I${LOCALBASE}/include -I${LOCALBASE}/include/jsoncpp
LDFLAGS+= -L${LOCALBASE}/lib
USE_LDCONFIG= yes
USE_OPENSSL= yes
USE_RC_SUBR= orthanc
WRKSRC= ${WRKDIR}/Orthanc-${PORTVERSION}
USERS= orthanc
GROUPS= orthanc
# This is mongoose sources, downloaded from Orthanc author homepage. Orthanc
# requires mongoose webserver, but after version 3.8, mongoose developers has
# changed the license from MIT to GPLv2 only. This action made illegal to
# combine new mongoose versions with GPLv3 only Orthanc.
# We download sources manually and pass USE_SYSTEM_MONGOOSE=OFF to Orthanc
# cmake variables to tell that mongoose is not presented on the host OS and
# should be build together with the software instead.
# https://www.mail-archive.com/mongoose-users@googlegroups.com/msg00625.html
post-extract:
${MKDIR} ${WRKSRC}/ThirdPartyDownloads
${CP} ${DISTDIR}/${DIST_SUBDIR}/mongoose-3.8.tgz ${WRKSRC}/ThirdPartyDownloads
post-install:
${MKDIR} ${STAGEDIR}/var/db/orthanc/db/db-v5
${MKDIR} ${STAGEDIR}${DATADIR}/plugins
${MKDIR} ${STAGEDIR}${ETCDIR}
${REINPLACE_CMD} -e 's|%%PREFIX%%|${PREFIX}|g' \
${WRKSRC}/Resources/Configuration.json > ${STAGEDIR}${ETCDIR}/orthanc.json.sample
.include <bsd.port.mk>

4
science/orthanc/distinfo Normal file
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@ -0,0 +1,4 @@
SHA256 (orthanc/Orthanc-0.8.6.tar.gz) = 0668e23dbdf4aa12bf417cf22bfb7b50379797fc6b1132a582789289d1728e69
SIZE (orthanc/Orthanc-0.8.6.tar.gz) = 716036
SHA256 (orthanc/mongoose-3.8.tgz) = 6afc2c377614a01a24b78560a62d1316b29372afe08eae3715b56c877be71c6e
SIZE (orthanc/mongoose-3.8.tgz) = 1577314

40
science/orthanc/files/orthanc.in Normal file
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@ -0,0 +1,40 @@
#!/bin/sh
# $FreeBSD$
#
# PROVIDE: orthanc
# REQUIRE: LOGIN
# KEYWORD: shutdown
#
# Add these lines to /etc/rc.conf.local or /etc/rc.conf
# to enable this service:
#
# orthanc_enable (bool): Set to NO by default.
# Set it to YES to enable Orthanc.
# orthanc_flags (str): Set to %%ETCDIR%%/orthanc.json
# by default.
. /etc/rc.subr
name=orthanc
rcvar=orthanc_enable
desc="RESTful DICOM server for healthcare and medical research"
load_rc_config $name
: ${orthanc_enable:=NO}
: ${orthanc_flags="%%ETCDIR%%/orthanc.json"}
start_precmd=orthanc_prestart
pidfile=/var/run/orthanc.pid
procname=%%PREFIX%%/sbin/Orthanc
command=/usr/sbin/daemon
command_args=" -f -p ${pidfile} -u orthanc ${procname} ${orthanc_flags}"
orthanc_prestart()
{
# Have to empty rc_flags so they don't get passed to daemon(8)
rc_flags=""
}
run_rc_command "$1"

61
science/orthanc/files/patch-CMakeLists.txt Normal file
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@ -0,0 +1,61 @@
--- CMakeLists.txt.orig 2015-02-12 13:47:38 UTC
+++ CMakeLists.txt
@@ -20,6 +20,7 @@ SET(ALLOW_DOWNLOADS OFF CACHE BOOL "Allo
SET(UNIT_TESTS_WITH_HTTP_CONNEXIONS ON CACHE BOOL "Allow unit tests to make HTTP requests")
SET(ENABLE_JPEG ON CACHE BOOL "Enable JPEG decompression")
SET(ENABLE_JPEG_LOSSLESS ON CACHE BOOL "Enable JPEG-LS (Lossless) decompression")
+SET(BUILD_UNIT_TESTS ON CACHE BOOL "Build UnitTests binary")
# Advanced parameters to fine-tune linking against system libraries
SET(USE_SYSTEM_JSONCPP ON CACHE BOOL "Use the system version of JsonCpp")
@@ -359,22 +360,24 @@ install(
## Build the unit tests
#####################################################################
-if (UNIT_TESTS_WITH_HTTP_CONNEXIONS)
- add_definitions(-DUNIT_TESTS_WITH_HTTP_CONNEXIONS=1)
-else()
- add_definitions(-DUNIT_TESTS_WITH_HTTP_CONNEXIONS=0)
-endif()
-
-add_definitions(-DORTHANC_BUILD_UNIT_TESTS=1)
-include(${CMAKE_SOURCE_DIR}/Resources/CMake/GoogleTestConfiguration.cmake)
-add_executable(UnitTests
- ${GTEST_SOURCES}
- ${ORTHANC_UNIT_TESTS_SOURCES}
- )
-target_link_libraries(UnitTests ServerLibrary CoreLibrary ${STATIC_LUA} ${STATIC_GOOGLE_LOG})
-
-if (${OPENSSL_SOURCES_LENGTH} GREATER 0)
- target_link_libraries(UnitTests OpenSSL)
+if (BUILD_UNIT_TESTS)
+ if (UNIT_TESTS_WITH_HTTP_CONNEXIONS)
+ add_definitions(-DUNIT_TESTS_WITH_HTTP_CONNEXIONS=1)
+ else()
+ add_definitions(-DUNIT_TESTS_WITH_HTTP_CONNEXIONS=0)
+ endif()
+
+ add_definitions(-DORTHANC_BUILD_UNIT_TESTS=1)
+ include(${CMAKE_SOURCE_DIR}/Resources/CMake/GoogleTestConfiguration.cmake)
+ add_executable(UnitTests
+ ${GTEST_SOURCES}
+ ${ORTHANC_UNIT_TESTS_SOURCES}
+ )
+ target_link_libraries(UnitTests ServerLibrary CoreLibrary ${STATIC_LUA} ${STATIC_GOOGLE_LOG})
+
+ if (${OPENSSL_SOURCES_LENGTH} GREATER 0)
+ target_link_libraries(UnitTests OpenSSL)
+ endif()
endif()
@@ -443,7 +446,8 @@ if (BUILD_CLIENT_LIBRARY)
)
endif()
- elseif (${CMAKE_SYSTEM_NAME} STREQUAL "Darwin")
+ elseif (${CMAKE_SYSTEM_NAME} STREQUAL "Darwin" OR
+ ${CMAKE_SYSTEM_NAME} STREQUAL "FreeBSD")
# TODO
target_link_libraries(OrthancClient pthread)

11
science/orthanc/files/patch-Core_Compression_HierarchicalZipWriter.cpp Normal file
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@ -0,0 +1,11 @@
--- Core/Compression/HierarchicalZipWriter.cpp.orig 2015-02-12 13:47:38 UTC
+++ Core/Compression/HierarchicalZipWriter.cpp
@@ -53,7 +53,7 @@ namespace Orthanc
if (c == '^')
c = ' ';
- if (c < 128 &&
+ if (c <= 127 &&
c >= 0)
{
if (isspace(c))

11
science/orthanc/files/patch-Core_ImageFormats_ImageProcessing.cpp Normal file
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@ -0,0 +1,11 @@
--- Core/ImageFormats/ImageProcessing.cpp.orig 2015-02-12 13:47:38 UTC
+++ Core/ImageFormats/ImageProcessing.cpp
@@ -209,7 +209,7 @@ namespace Orthanc
void MultiplyConstantInternal(ImageAccessor& image,
float factor)
{
- if (abs(factor - 1.0f) <= std::numeric_limits<float>::epsilon())
+ if (std::abs(factor - 1.0f) <= std::numeric_limits<float>::epsilon())
{
return;
}

20
science/orthanc/files/patch-Core_MultiThreading_Mutex.cpp Normal file
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@ -0,0 +1,20 @@
--- Core/MultiThreading/Mutex.cpp.orig 2015-02-12 13:47:38 UTC
+++ Core/MultiThreading/Mutex.cpp
@@ -37,7 +37,7 @@
#if defined(_WIN32)
#include <windows.h>
-#elif defined(__linux) || defined(__FreeBSD_kernel__) || defined(__APPLE__)
+#elif defined(__linux) || defined(__FreeBSD_kernel__) || defined(__APPLE__) || defined(__FreeBSD__)
#include <pthread.h>
#else
#error Support your platform here
@@ -75,7 +75,7 @@ namespace Orthanc
}
-#elif defined(__linux) || defined(__FreeBSD_kernel__) || defined(__APPLE__)
+#elif defined(__linux) || defined(__FreeBSD_kernel__) || defined(__APPLE__) || defined(__FreeBSD__)
struct Mutex::PImpl
{

11
science/orthanc/files/patch-Core_MultiThreading_ThreadedCommandProcessor.cpp Normal file
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@ -0,0 +1,11 @@
--- Core/MultiThreading/ThreadedCommandProcessor.cpp.orig 2015-02-12 13:47:38 UTC
+++ Core/MultiThreading/ThreadedCommandProcessor.cpp
@@ -175,7 +175,7 @@ namespace Orthanc
{
boost::mutex::scoped_lock lock(mutex_);
- while (!remainingCommands_ == 0)
+ while (remainingCommands_ != 0)
{
processedCommand_.wait(lock);
}

38
science/orthanc/files/patch-Core_Toolbox.cpp Normal file
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@ -0,0 +1,38 @@
--- Core/Toolbox.cpp.orig 2015-02-12 13:47:38 UTC
+++ Core/Toolbox.cpp
@@ -59,7 +59,7 @@
#include <limits.h> /* PATH_MAX */
#endif
-#if defined(__linux) || defined(__FreeBSD_kernel__)
+#if defined(__linux) || defined(__FreeBSD_kernel__) || defined(__FreeBSD__)
#include <limits.h> /* PATH_MAX */
#include <signal.h>
#include <unistd.h>
@@ -116,7 +116,7 @@ namespace Orthanc
{
#if defined(_WIN32)
::Sleep(static_cast<DWORD>(microSeconds / static_cast<uint64_t>(1000)));
-#elif defined(__linux) || defined(__APPLE__) || defined(__FreeBSD_kernel__)
+#elif defined(__linux) || defined(__APPLE__) || defined(__FreeBSD_kernel__) || defined(__FreeBSD__)
usleep(microSeconds);
#else
#error Support your platform here
@@ -503,7 +503,7 @@ namespace Orthanc
return std::string(&buffer[0]);
}
-#elif defined(__linux) || defined(__FreeBSD_kernel__)
+#elif defined(__linux) || defined(__FreeBSD_kernel__) || defined(__FreeBSD__)
static std::string GetPathToExecutableInternal()
{
std::vector<char> buffer(PATH_MAX + 1);
@@ -633,7 +633,7 @@ namespace Orthanc
result.reserve(source.size() + 1);
for (size_t i = 0; i < source.size(); i++)
{
- if (source[i] < 128 && source[i] >= 0 && !iscntrl(source[i]))
+ if (source[i] <= 127 && source[i] >= 0 && !iscntrl(source[i]))
{
result.push_back(source[i]);
}

11
science/orthanc/files/patch-OrthancServer_Internals_StoreScp.cpp Normal file
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@ -0,0 +1,11 @@
--- OrthancServer/Internals/StoreScp.cpp.orig 2015-02-12 13:47:38 UTC
+++ OrthancServer/Internals/StoreScp.cpp
@@ -182,7 +182,7 @@ namespace Orthanc
// check the image to make sure it is consistent, i.e. that its sopClass and sopInstance correspond
// to those mentioned in the request. If not, set the status in the response message variable.
- if ((rsp->DimseStatus == STATUS_Success))
+ if (rsp->DimseStatus == STATUS_Success)
{
// which SOP class and SOP instance ?
if (!DU_findSOPClassAndInstanceInDataSet(*imageDataSet, sopClass, sopInstance, /*opt_correctUIDPadding*/ OFFalse))

11
science/orthanc/files/patch-Plugins_Engine_PluginsManager.cpp Normal file
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@ -0,0 +1,11 @@
--- Plugins/Engine/PluginsManager.cpp.orig 2015-02-12 13:47:38 UTC
+++ Plugins/Engine/PluginsManager.cpp
@@ -42,7 +42,7 @@
#ifdef WIN32
#define PLUGIN_EXTENSION ".dll"
-#elif defined(__linux) || defined(__FreeBSD_kernel__)
+#elif defined(__linux) || defined(__FreeBSD_kernel__) || defined(__FreeBSD__)
#define PLUGIN_EXTENSION ".so"
#elif defined(__APPLE__) && defined(__MACH__)
#define PLUGIN_EXTENSION ".dylib"

38
science/orthanc/files/patch-Plugins_Engine_SharedLibrary.cpp Normal file
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@ -0,0 +1,38 @@
--- Plugins/Engine/SharedLibrary.cpp.orig 2015-02-12 13:47:38 UTC
+++ Plugins/Engine/SharedLibrary.cpp
@@ -36,7 +36,7 @@
#if defined(_WIN32)
#include <windows.h>
-#elif defined(__linux) || (defined(__APPLE__) && defined(__MACH__)) || defined(__FreeBSD_kernel__)
+#elif defined(__linux) || (defined(__APPLE__) && defined(__MACH__)) || defined(__FreeBSD_kernel__) || defined(__FreeBSD__)
#include <dlfcn.h>
#else
#error Support your platform here
@@ -58,7 +58,7 @@ namespace Orthanc
throw OrthancException(ErrorCode_SharedLibrary);
}
-#elif defined(__linux) || (defined(__APPLE__) && defined(__MACH__)) || defined(__FreeBSD_kernel__)
+#elif defined(__linux) || (defined(__APPLE__) && defined(__MACH__)) || defined(__FreeBSD_kernel__) || defined(__FreeBSD__)
handle_ = ::dlopen(path.c_str(), RTLD_NOW);
if (handle_ == NULL)
{
@@ -84,7 +84,7 @@ namespace Orthanc
{
#if defined(_WIN32)
::FreeLibrary((HMODULE)handle_);
-#elif defined(__linux) || (defined(__APPLE__) && defined(__MACH__)) || defined(__FreeBSD_kernel__)
+#elif defined(__linux) || (defined(__APPLE__) && defined(__MACH__)) || defined(__FreeBSD_kernel__) || defined(__FreeBSD__)
::dlclose(handle_);
#else
#error Support your platform here
@@ -102,7 +102,7 @@ namespace Orthanc
#if defined(_WIN32)
return ::GetProcAddress((HMODULE)handle_, name.c_str());
-#elif defined(__linux) || (defined(__APPLE__) && defined(__MACH__)) || defined(__FreeBSD_kernel__)
+#elif defined(__linux) || (defined(__APPLE__) && defined(__MACH__)) || defined(__FreeBSD_kernel__) || defined(__FreeBSD__)
return ::dlsym(handle_, name.c_str());
#else
#error Support your platform here

19
science/orthanc/files/patch-Resources_CMake_AutoGeneratedCode.cmake Normal file
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@ -0,0 +1,19 @@
--- Resources/CMake/AutoGeneratedCode.cmake.orig 2015-02-12 13:47:38 UTC
+++ Resources/CMake/AutoGeneratedCode.cmake
@@ -3,6 +3,7 @@ set(AUTOGENERATED_SOURCES)
file(MAKE_DIRECTORY ${AUTOGENERATED_DIR})
include_directories(${AUTOGENERATED_DIR})
+include(FindPythonInterp)
macro(EmbedResources)
# Convert a semicolon separated list to a whitespace separated string
@@ -26,7 +27,7 @@ macro(EmbedResources)
"${TARGET_BASE}.h"
"${TARGET_BASE}.cpp"
COMMAND
- python
+ ${PYTHON_EXECUTABLE}
"${CMAKE_CURRENT_SOURCE_DIR}/Resources/EmbedResources.py"
"${AUTOGENERATED_DIR}/EmbeddedResources"
${SCRIPT_ARGUMENTS}

10
science/orthanc/files/patch-Resources_CMake_BoostConfiguration.cmake Normal file
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@ -0,0 +1,10 @@
--- Resources/CMake/BoostConfiguration.cmake.orig 2015-02-12 13:47:38 UTC
+++ Resources/CMake/BoostConfiguration.cmake
@@ -56,6 +56,7 @@ if (BOOST_STATIC)
if (${CMAKE_SYSTEM_NAME} STREQUAL "Linux" OR
${CMAKE_SYSTEM_NAME} STREQUAL "Darwin" OR
+ ${CMAKE_SYSTEM_NAME} STREQUAL "FreeBSD" OR
${CMAKE_SYSTEM_NAME} STREQUAL "kFreeBSD")
list(APPEND BOOST_SOURCES
${BOOST_SOURCES_DIR}/libs/thread/src/pthread/once.cpp

21
science/orthanc/files/patch-Resources_CMake_Compiler.cmake Normal file
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@ -0,0 +1,21 @@
--- Resources/CMake/Compiler.cmake.orig 2015-02-12 13:47:38 UTC
+++ Resources/CMake/Compiler.cmake
@@ -4,7 +4,8 @@ if (${CMAKE_COMPILER_IS_GNUCXX})
set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -Wall -Wno-long-long -Wno-implicit-function-declaration")
# --std=c99 makes libcurl not to compile
# -pedantic gives a lot of warnings on OpenSSL
- set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -Wall -pedantic -Wno-long-long -Wno-variadic-macros")
+ # with -pedantic we failing to build headers from boost, which have comma at the end of enum's
+ set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -Wall -Wno-long-long -Wno-variadic-macros")
if (CMAKE_CROSSCOMPILING)
# http://stackoverflow.com/a/3543845/881731
@@ -79,6 +80,8 @@ elseif (${CMAKE_SYSTEM_NAME} STREQUAL "D
)
link_libraries(iconv)
+elseif (${CMAKE_SYSTEM_NAME} STREQUAL "FreeBSD")
+ link_libraries(uuid pthread)
endif()

15
science/orthanc/files/patch-Resources_CMake_SQLiteConfiguration.cmake Normal file
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@ -0,0 +1,15 @@
--- Resources/CMake/SQLiteConfiguration.cmake.orig 2015-02-12 13:47:38 UTC
+++ Resources/CMake/SQLiteConfiguration.cmake
@@ -28,8 +28,11 @@ else()
message(FATAL_ERROR "Please install the libsqlite3-dev package")
endif()
+ find_path(SQLITE_INCLUDE_DIR sqlite3.h)
+ message("SQLite include dir: ${SQLITE_INCLUDE_DIR}")
+
# Autodetection of the version of SQLite
- file(STRINGS "/usr/include/sqlite3.h" SQLITE_VERSION_NUMBER1 REGEX "#define SQLITE_VERSION_NUMBER.*$")
+ file(STRINGS "${SQLITE_INCLUDE_DIR}/sqlite3.h" SQLITE_VERSION_NUMBER1 REGEX "#define SQLITE_VERSION_NUMBER.*$")
string(REGEX REPLACE "#define SQLITE_VERSION_NUMBER(.*)$" "\\1" SQLITE_VERSION_NUMBER ${SQLITE_VERSION_NUMBER1})
message("Detected version of SQLite: ${SQLITE_VERSION_NUMBER}")

25
science/orthanc/files/patch-Resources_Configuration.json Normal file
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@ -0,0 +1,25 @@
--- Resources/Configuration.json.orig 2015-02-12 13:47:38 UTC
+++ Resources/Configuration.json
@@ -9,12 +9,12 @@
// Path to the directory that holds the heavyweight files
// (i.e. the raw DICOM instances)
- "StorageDirectory" : "OrthancStorage",
+ "StorageDirectory" : "/var/db/orthanc/db-v5",
// Path to the directory that holds the SQLite index (if unset,
// the value of StorageDirectory is used). This index could be
// stored on a RAM-drive or a SSD device for performance reasons.
- "IndexDirectory" : "OrthancStorage",
+ "IndexDirectory" : "/var/db/orthanc/db-v5",
// Enable the transparent compression of the DICOM instances
"StorageCompression" : false,
@@ -39,6 +39,7 @@
// folders, in which case they will be scanned non-recursively to
// find shared libraries.
"Plugins" : [
+ "%%PREFIX%%/share/orthanc/plugins/"
],

20
science/orthanc/pkg-descr Normal file
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@ -0,0 +1,20 @@
Orthanc aims at providing a simple, yet powerful standalone DICOM
server. It is designed to improve the DICOM flows in hospitals and to
support research about the automated analysis of medical images.
Orthanc can turn any computer running Windows, Linux, FreeBSD or OS X
into a DICOM store (in other words, a mini-PACS system). Its
architecture is lightweight and standalone, meaning that no complex
database administration is required, nor the installation of third-party
dependencies.
What makes Orthanc unique is the fact that it provides a RESTful API.
Thanks to this major feature, it is possible to drive Orthanc from any
computer language. The DICOM tags of the stored medical images can be
downloaded in the JSON file format. Furthermore, standard PNG images can
be generated on-the-fly from the DICOM instances by Orthanc.
Orthanc lets its users focus on the content of the DICOM files, hiding
the complexity of the DICOM format and of the DICOM protocol.
WWW: http://www.orthanc-server.com/

12
science/orthanc/pkg-plist Normal file
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@ -0,0 +1,12 @@
@dir(orthanc,orthanc,700) %%DATADIR%%/plugins
@dir(orthanc,orthanc,700) /var/db/orthanc/db/db-v5
@dir(orthanc,orthanc,700) /var/db/orthanc/db
@dir(orthanc,orthanc,700) /var/db/orthanc
@sample(orthanc,orthanc,600) %%ETCDIR%%/orthanc.json.sample
include/orthanc/OrthancCDatabasePlugin.h
include/orthanc/OrthancCPlugin.h
include/orthanc/OrthancCppClient.h
include/orthanc/OrthancCppDatabasePlugin.h
lib/libOrthancClient.so
lib/libOrthancClient.so.0.8
sbin/Orthanc