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- Update to version 2.0.5

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- Add RESTRICTED due to a non-commercial use licence.

PR:		ports/121794
Submitted by:	KATO Tsuguru <tkato432@yahoo.com>
Approved by:	thierry and tabthorpe (mentors)
This commit is contained in:
Philippe Audeoud 2008-03-19 13:31:52 +00:00
parent 972088dccc
commit 5a299a59fb
Notes: svn2git 2021-03-31 03:12:20 +00:00 
svn path=/head/; revision=209372
2 changed files with 10 additions and 21 deletions
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biology/clustalw/distinfo
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MD5 (clustalw-2.0.3-src.tar.gz) = 77e7cf7fcea6084da22d2b19c52356c2
SHA256 (clustalw-2.0.3-src.tar.gz) = 01a0dc2a3dc8d342367f5f7117749195a1c0d217c105d0a43e02565979cc459a
SIZE (clustalw-2.0.3-src.tar.gz) = 287805
MD5 (clustalw-2.0.5-src.tar.gz) = f18a332a61f9cd90fc7c88e122ef7487
SHA256 (clustalw-2.0.5-src.tar.gz) = 6a21bb7d389cc145c4175ae99f227eda356415731952bb2e58b6c951a205046a
SIZE (clustalw-2.0.5-src.tar.gz) = 289291

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biology/clustalw/pkg-descr
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CLUSTAL W Multiple Sequence Alignment Program
ClustalW2 is a general purpose multiple sequence alignment program for
DNA or proteins. It produces biologically meaningful multiple sequence
alignments of divergent sequences. It calculates the best match for the
selected sequences, and lines them up so that the identities,
similarities and differences can be seen. Evolutionary relationships
can be seen via viewing Cladograms or Phylograms.
Clustal W is a multiple alignment program for DNA or proteins.
Clustal W was written by Des Higgins (des@chah.ucc.ie), Julie Thompson
(julie@IGBMC.u-strasbg.fr), and Toby Gibson (Gibson@EMBL-Heidelberg.DE).
Version 2.0 has been completely rewritten in C++.
Original Paper:
Thompson, J.D., D. G. Higgins and T. J. Gibson. 1994. CLUSTAL W:
improving the sensitivity of progressive multiple sequence alignment
through sequence weighting, positions-specific gap penalties and
weight matrix choice. Nucleic Acids Research 22: 4673-4680.
Tips:
Higgins, D. G., J. D. Thompson, and T. J. Gibson. 1996. Using
CLUSTAL for multiple sequence alignments. Methods in Enzymology 266:
383-402.
WWW: http://bips.u-strasbg.fr/fr/Documentation/ClustalX/
WWW: http://www.clustal.org/