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The BioCocoa framework provides developers with the opportunity to add

Browse Source 
support for reading and writing BEAST, Clustal, EMBL, Fasta, GCG-MSF, GDE,
Hennig86, NCBI, NEXUS, NONA, PDB, Phylip, PIR, Plain/Raw, Swiss-Prot and
TNT files by writing only three lines of code.
The framework is written in Cocoa (Objective-C).

WWW: http://bioinformatics.org/biococoa/
This commit is contained in:
Dirk Meyer 2006-12-30 09:20:54 +00:00
parent ba5de55346
commit 5779dde040
Notes: svn2git 2021-03-31 03:12:20 +00:00 
svn path=/head/; revision=181036
5 changed files with 45 additions and 0 deletions
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1
biology/Makefile
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@ -10,6 +10,7 @@
SUBDIR += avida
SUBDIR += babel
SUBDIR += belvu
SUBDIR += biococoa
SUBDIR += biojava
SUBDIR += blast
SUBDIR += boinc-simap

26
biology/biococoa/Makefile Normal file
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@ -0,0 +1,26 @@
# New ports collection makefile for: biococoa
# Date created: 30 Dec 2006
# Whom: dirk.meyer@dinoex.sub.org
#
# $FreeBSD$
#
PORTNAME= biococoa
PORTVERSION= 1.6.0
CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_DEBIAN}
MASTER_SITE_SUBDIR= pool/main/b/biococoa.app
DISTNAME= biococoa.app_${PORTVERSION}.orig
MAINTAINER= dinoex@FreeBSD.org
COMMENT= Bioinformatics framework
USE_GNUSTEP= yes
USE_GNUSTEP_PREFIX= yes
USE_GNUSTEP_BACK= yes
USE_GNUSTEP_BUILD= yes
USE_GNUSTEP_INSTALL= yes
WRKSRC= ${WRKDIR}/biococoa
.include <bsd.port.mk>

3
biology/biococoa/distinfo Normal file
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@ -0,0 +1,3 @@
MD5 (biococoa.app_1.6.0.orig.tar.gz) = ec2194ffc9f5674331ea51fe02b61b3e
SHA256 (biococoa.app_1.6.0.orig.tar.gz) = dc9afef09686699532a5fa918de18778ae1bd3fea3a66d4bc9158b35f11d1931
SIZE (biococoa.app_1.6.0.orig.tar.gz) = 22089

7
biology/biococoa/pkg-descr Normal file
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@ -0,0 +1,7 @@
The BioCocoa framework provides developers with the opportunity to add
support for reading and writing BEAST, Clustal, EMBL, Fasta, GCG-MSF, GDE,
Hennig86, NCBI, NEXUS, NONA, PDB, Phylip, PIR, Plain/Raw, Swiss-Prot and
TNT files by writing only three lines of code.
The framework is written in Cocoa (Objective-C).
WWW: http://bioinformatics.org/biococoa/

8
biology/biococoa/pkg-plist Normal file
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@ -0,0 +1,8 @@
Local/Applications/BioCocoa.app/BioCocoa
Local/Applications/BioCocoa.app/Resources/BioCocoa.desktop
Local/Applications/BioCocoa.app/Resources/Info-gnustep.plist
Local/Applications/BioCocoa.app/Resources/biococoa.tiff
Local/Applications/BioCocoa.app/library_paths.openapp
Local/Applications/BioCocoa.app/stamp.make
@dirrm Local/Applications/BioCocoa.app/Resources
@dirrm Local/Applications/BioCocoa.app