- Update to 2007.04.18.1830

- Respect X11BASE PR: 111890 Submitted by: Jason Bacon <bacon@smithers.neuro.mcw.edu> (maintainer)
svn path=/head/; revision=190541
2007-04-21 13:37:39 +00:00 · 2007-04-21 13:37:39 +00:00 · 421d129653 · 2021-03-31 03:12:20 +00:00
commit 421d129653
parent d2fa4478f3
5 changed files with 161 additions and 197 deletions
--- a/science/afni/Makefile
+++ b/science/afni/Makefile
@ -16,14 +16,14 @@
 # Makefile.BSD, which is included in the source distribution.

 PORTNAME=	afni
-PORTVERSION=	2006.06.30.1332
+PORTVERSION=	2007.04.18.1830
 CATEGORIES=	science biology graphics
 MASTER_SITES=	http://www.neuro.mcw.edu/~bacon/Ports/distfiles/AFNI/${PORTVERSION}/ \
 		http://afni.nimh.nih.gov/pub/dist/tgz/
-DISTFILES=	afni_src.tgz afni_doc.tgz afni.1 \
+DISTFILES=	afni_src.tgz afni.1 \
 		TTatlas+tlrc.BRIK.gz TTatlas+tlrc.HEAD CA_EZ_v1.3c-May0806.tgz
 DIST_SUBDIR=	AFNI-${PORTVERSION}
-EXTRACT_ONLY=	afni_src.tgz afni_doc.tgz CA_EZ_v1.3c-May0806.tgz
+EXTRACT_ONLY=	afni_src.tgz CA_EZ_v1.3c-May0806.tgz

 MAINTAINER=	bacon@smithers.neuro.mcw.edu
 COMMENT=	Advanced Functional Neuro Imaging
@ -31,12 +31,13 @@ COMMENT=	Advanced Functional Neuro Imaging
 RUN_DEPENDS=	cjpeg:${PORTSDIR}/graphics/jpeg \
 		mpeg_encode:${PORTSDIR}/multimedia/mpeg_encode \
 		whirlgif:${PORTSDIR}/graphics/whirlgif \
-		ppmtogif:${PORTSDIR}/graphics/netpbm
+		ppmtogif:${PORTSDIR}/graphics/netpbm \
+		endian:${PORTSDIR}/sysutils/endian

 .include <bsd.port.pre.mk>

 .if ${ARCH} == "sparc64"
-BROKEN=	Does not compile on sparc64: "undefined reference to `_mcount'"
+BROKEN=	Does not compile on sparc64: "undefined reference to '_mcount'"
 .endif

 USE_GETTEXT=	yes
@ -54,89 +55,72 @@ ALL_TARGET=	vastness suma

 MAN1=	afni.1

-# these need not to be stripped
-SCRIPTS=\
-	@2dwarper \
-	@4Daverage \
-	@AfniOrient2RAImap \
-	@AfniOrientSign \
-	@Align_Centers \
-	@Center_Distance \
-	@CheckForAfniDset \
-	@CommandGlobb \
-	@DoPerRoi.py \
-	@DTI_studio_reposition \
-	@FromRAI \
-	@GetAfniOrient \
-	@GetAfniPrefix \
-	@GetAfniView \
-	@IsoMasks \
-	@NoExt \
-	@Purify_1D \
-	@RenamePanga \
-	@SUMA_AlignToExperiment \
-	@SUMA_Make_Spec_Caret \
-	@SUMA_Make_Spec_FS \
-	@SUMA_Make_Spec_SF \
-	@ToRAI \
-	@UpdateAfni \
-	@VolCenter \
-	@align_partial_oblique \
-	@auto_align \
-	@auto_tlrc \
-	@clip_volume \
-	@fix_FSsphere \
-	@make_stim_file \
-	@np \
-	@parse_afni_name \
-	@parse_name \
-	afni_base.py \
-	3dMax \
-	suma_change_spec
-
-PLIST_FILES+=	${SCRIPTS:S|^|bin/|}
-
 INSTALL_WRKSRC=	${WRKSRC}/BSD
-INSTALL_TEMP=	${WRKSRC}/Backup.BSD
+STAGE=		${WRKSRC}/stage
+
+X11R6_FILES=	coxplot/Makefile \
+		coxplot/Makefile.f2c \
+		3DEdge/src/Makefile \
+		SUMA/SUMA_Makefile \
+		edt_blur.c \
+		suma_datasets.c \
+		SUMA/SUMA_Load_Surface_Object.c \
+		SUMA/SUMA_MiscFunc.c \
+		SUMA/SUMA_ParseCommands.c \
+		SUMA/SUMA_StripPath.c \
+		SUMA/GLUT/libglut/glut_event.c \
+		SUMA/SUMA_Surface_IO.c

 post-extract:
-	${CP} -f ${FILESDIR}/Makefile.FreeBSD_PORT ${WRKSRC}
-	${CP} ${DISTDIR}/${DIST_SUBDIR}/afni.1 ${WRKDIR}
-	${REINPLACE_CMD} -e 's|%%PREFIX%%|${PREFIX}|g' ${WRKDIR}/afni.1
-	@${REINPLACE_CMD} -e 's|/usr/X11R6|${X11BASE}|g' ${WRKSRC}/Makefile.FreeBSD_PORT
+	@${CP} -f ${FILESDIR}/Makefile.FreeBSD_PORT ${WRKSRC}
+.for f in ${X11R6_FILES}
+	@${REINPLACE_CMD} -e 's|/usr/X11R6|$${X11BASE}|g' ${WRKSRC}/${f}
+.endfor

-do-install:
-	${MKDIR} ${DATADIR} ${INSTALL_TEMP} \
-		${PREFIX}/lib/afni ${PREFIX}/include/afni
-	@${MV} ${INSTALL_WRKSRC}/libf2c.a ${INSTALL_TEMP}
-	${INSTALL_DATA} ${INSTALL_WRKSRC}/*.so ${INSTALL_WRKSRC}/*.a \
-		${PREFIX}/lib/afni
-	${INSTALL_DATA} ${INSTALL_WRKSRC}/*.h \
-		${PREFIX}/include/afni
-	${INSTALL_DATA} ${INSTALL_WRKSRC}/*.jpg ${INSTALL_WRKSRC}/*.txt \
-		${DATADIR}
-	@${MV}	${INSTALL_WRKSRC}/*.so \
-		${INSTALL_WRKSRC}/*.a \
-		${INSTALL_WRKSRC}/*.h \
-		${INSTALL_WRKSRC}/*.jpg \
-		${INSTALL_WRKSRC}/*.txt \
-	 	${INSTALL_WRKSRC}/cjpeg \
+post-build:
+	${MKDIR} ${STAGE}/bin \
+		${STAGE}/scripts \
+		${STAGE}/lib \
+		${STAGE}/include \
+		${STAGE}/trash \
+		${STAGE}/doc \
+		${STAGE}/share
+	${MV}	${INSTALL_WRKSRC}/libf2c.a \
+		${INSTALL_WRKSRC}/cjpeg \
 		${INSTALL_WRKSRC}/djpeg \
 		${INSTALL_WRKSRC}/mpeg_encode \
 		${INSTALL_WRKSRC}/whirlgif \
-		${INSTALL_TEMP}
-.for f in ${SCRIPTS}
-		${INSTALL_SCRIPT} ${INSTALL_WRKSRC}/${f} ${PREFIX}/bin
-		@${MV} ${INSTALL_WRKSRC}/${f} ${INSTALL_TEMP}
-.endfor
-	${INSTALL_PROGRAM} ${INSTALL_WRKSRC}/* ${PREFIX}/bin
+		${STAGE}/trash
+	${MV}	${INSTALL_WRKSRC}/*.a \
+		${INSTALL_WRKSRC}/*.so \
+		${STAGE}/lib
+	${MV}	${INSTALL_WRKSRC}/*.jpg \
+		${INSTALL_WRKSRC}/*.txt \
+		${INSTALL_WRKSRC}/AFNI.*rc \
+		${STAGE}/share
+	${MV}	${INSTALL_WRKSRC}/*.h \
+		${STAGE}/include
+	${MV}	${INSTALL_WRKSRC}/README* \
+		${STAGE}/doc
+	for binary in `${FILE} ${INSTALL_WRKSRC}/* | fgrep 'ELF' | ${AWK} -F ':' ' { print $$1 }'` ; do \
+		${MV} $${binary} ${STAGE}/bin ; \
+	done
+	${MV}	${INSTALL_WRKSRC}/* \
+		${STAGE}/scripts
+
+do-install:
+	${MKDIR} ${DATADIR} ${PREFIX}/lib/afni ${PREFIX}/include/afni
+	${INSTALL_DATA} ${STAGE}/lib/* ${PREFIX}/lib/afni
+	${INSTALL_DATA} ${STAGE}/include/* ${PREFIX}/include/afni
+	${INSTALL_DATA} ${STAGE}/share/* ${DATADIR}
+	${INSTALL_PROGRAM} ${STAGE}/bin/* ${PREFIX}/bin
+	${INSTALL_SCRIPT} ${STAGE}/scripts/* ${PREFIX}/bin
 	${INSTALL_DATA} ${DISTDIR}/${DIST_SUBDIR}/TTatlas* ${DATADIR}
 	${INSTALL_DATA} ${WRKDIR}/CA_EZ_v1.3c-May0806/* ${DATADIR}
-	${INSTALL_MAN} ${WRKDIR}/afni.1 ${PREFIX}/man/man1
-	@${MV} ${INSTALL_TEMP}/* ${INSTALL_WRKSRC}
+	${INSTALL_MAN} ${DISTDIR}/${DIST_SUBDIR}/afni.1 ${PREFIX}/man/man1
 .if !defined(NOPORTDOCS)
 	${MKDIR} ${DOCSDIR}
-	${INSTALL_DATA} ${WRKDIR}/afni_doc/* ${DOCSDIR}
+	${INSTALL_DATA} ${STAGE}/doc/* ${DOCSDIR}
 .endif

 post-install:
--- a/science/afni/distinfo
+++ b/science/afni/distinfo
@ -1,18 +1,15 @@
-MD5 (AFNI-2006.06.30.1332/afni_src.tgz) = 3b496d379b62c57e2d27a1554da5cf29
-SHA256 (AFNI-2006.06.30.1332/afni_src.tgz) = f249e0b8f89a9bae4751d10785acc9e9b71ae179b42853a6c2b1977a9c363c98
-SIZE (AFNI-2006.06.30.1332/afni_src.tgz) = 11178437
-MD5 (AFNI-2006.06.30.1332/afni_doc.tgz) = 3b085de85fc46908652ae287d1cceb38
-SHA256 (AFNI-2006.06.30.1332/afni_doc.tgz) = 28bfcb085d97f63a7e6b753d784908d7f90d9d3ba735d96b18c1e893af4d6cd1
-SIZE (AFNI-2006.06.30.1332/afni_doc.tgz) = 3267095
-MD5 (AFNI-2006.06.30.1332/afni.1) = 7678276880116dcab3324dbf43d0ebf6
-SHA256 (AFNI-2006.06.30.1332/afni.1) = 5598ef2f409797c463bc90d0db44c283357dde9fdaebb943ded70ac8c0aa11c3
-SIZE (AFNI-2006.06.30.1332/afni.1) = 1702
-MD5 (AFNI-2006.06.30.1332/TTatlas+tlrc.BRIK.gz) = f5a107b049bc426af5342565f4e5beee
-SHA256 (AFNI-2006.06.30.1332/TTatlas+tlrc.BRIK.gz) = 0b5b087006e07e05c5f0c8306acaade955924f744457cec0c00844cc2e9e67cd
-SIZE (AFNI-2006.06.30.1332/TTatlas+tlrc.BRIK.gz) = 159912
-MD5 (AFNI-2006.06.30.1332/TTatlas+tlrc.HEAD) = a0ca787a2996d7e66548176808503ac5
-SHA256 (AFNI-2006.06.30.1332/TTatlas+tlrc.HEAD) = 51c3fb158990616f355fea56886fc7c85d80ac96779f5a65a8f69207c2a85919
-SIZE (AFNI-2006.06.30.1332/TTatlas+tlrc.HEAD) = 1750
-MD5 (AFNI-2006.06.30.1332/CA_EZ_v1.3c-May0806.tgz) = dbb2caab5c030c505b306e1526d19150
-SHA256 (AFNI-2006.06.30.1332/CA_EZ_v1.3c-May0806.tgz) = b4e9a6bbb2324c01f70d50e911793e637373040c8cca8e5f17882a146396bc31
-SIZE (AFNI-2006.06.30.1332/CA_EZ_v1.3c-May0806.tgz) = 2652278
+MD5 (AFNI-2007.04.18.1830/afni_src.tgz) = 90ecae8727cadc6172517bc7149be67e
+SHA256 (AFNI-2007.04.18.1830/afni_src.tgz) = 53796de972179f122ab7c557bf29d3511ed113119d04707e16b0766763f49c21
+SIZE (AFNI-2007.04.18.1830/afni_src.tgz) = 11283995
+MD5 (AFNI-2007.04.18.1830/afni.1) = 80cc1f1c6ca0ef59a3032ad63abfbdd5
+SHA256 (AFNI-2007.04.18.1830/afni.1) = 647815326aa676d005fa15de116a6f046b486530aa50a3100d8b29c11da8aaf7
+SIZE (AFNI-2007.04.18.1830/afni.1) = 1702
+MD5 (AFNI-2007.04.18.1830/TTatlas+tlrc.BRIK.gz) = f5a107b049bc426af5342565f4e5beee
+SHA256 (AFNI-2007.04.18.1830/TTatlas+tlrc.BRIK.gz) = 0b5b087006e07e05c5f0c8306acaade955924f744457cec0c00844cc2e9e67cd
+SIZE (AFNI-2007.04.18.1830/TTatlas+tlrc.BRIK.gz) = 159912
+MD5 (AFNI-2007.04.18.1830/TTatlas+tlrc.HEAD) = a0ca787a2996d7e66548176808503ac5
+SHA256 (AFNI-2007.04.18.1830/TTatlas+tlrc.HEAD) = 51c3fb158990616f355fea56886fc7c85d80ac96779f5a65a8f69207c2a85919
+SIZE (AFNI-2007.04.18.1830/TTatlas+tlrc.HEAD) = 1750
+MD5 (AFNI-2007.04.18.1830/CA_EZ_v1.3c-May0806.tgz) = dbb2caab5c030c505b306e1526d19150
+SHA256 (AFNI-2007.04.18.1830/CA_EZ_v1.3c-May0806.tgz) = b4e9a6bbb2324c01f70d50e911793e637373040c8cca8e5f17882a146396bc31
+SIZE (AFNI-2007.04.18.1830/CA_EZ_v1.3c-May0806.tgz) = 2652278
--- a/science/afni/files/Makefile.FreeBSD_PORT
+++ b/science/afni/files/Makefile.FreeBSD_PORT
@ -62,15 +62,15 @@ CCMIN  = ${CC}
 CCD    = ${CC} ${CCDEBS}
 CCSVD  = ${CC} -O0

-IFLAGS = -I. -I/usr/X11R6/include -I/usr/local/include
-LFLAGS = -s -L. -L/usr/X11R6/lib
+IFLAGS = -I. -I${X11BASE}/include -I/usr/local/include
+LFLAGS = -s -L. -L${X11BASE}/lib

 MAKE   = gmake

 PLUGIN_SUFFIX = so
 PLUGIN_LFLAGS = -shared
 PLUGIN_CC     = ${CC}
-PLFLAGS       = -s -rdynamic -L. -L/usr/X11R6/lib
+PLFLAGS       = -s -rdynamic -L. -L${X11BASE}/lib

 AR     = /usr/bin/ar
 RANLIB = /usr/bin/ranlib
@ -94,8 +94,8 @@ LLIBS  = -lmri -lXm -lXp -lXpm -lXext -lXmu -lXt -lX11 -lm $(LZLIB)

 # vvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvv
 # For suma (NO STATIC LINKING OF GL libs)
-SUMA_INCLUDE_PATH = -I/usr/X11R6/include -I/usr/local/include -I./ -I../ -I../niml/ -Igts/src 
-SUMA_LINK_PATH = -L/usr/lib -L/usr/X11R6/lib -L../
+SUMA_INCLUDE_PATH = -I${X11BASE}/include -I/usr/local/include -I./ -I../ -I../niml/ -Igts/src 
+SUMA_LINK_PATH = -L/usr/lib -L${X11BASE}/lib -L../
 #use -lGLw if you have libGLw.a or libGLw.so* or 
 #  -lMesaGLw if you have Mesa's version (libMesaGLw*) of libGLw
 SUMA_LINK_LIB = -lXm -lGLw -lGLU -lGL -lXmu -lXp -lXt -lXext -lX11 -lm $(LZLIB)
--- a/science/afni/pkg-message
+++ b/science/afni/pkg-message
@ -9,4 +9,9 @@ bacon@smithers.neuro.mcw.edu
 For AFNI configuration and usage, please visit the AFNI WEB site at 

 http://afni.nimh.nih.gov.
+
+For large 3dDeconvolve analyses, you may need to increase the shared
+memory limit on your system.  For instructions, visit
+
+http://www.neuro.mcw.edu/~bacon/FreeBSD_MRI/
 =============================================================================
--- a/science/afni/pkg-plist
+++ b/science/afni/pkg-plist
@ -1,3 +1,5 @@
+bin/1dMarry
+bin/1dSEM
 bin/1dcat
 bin/1ddot
 bin/1deval
@ -22,6 +24,8 @@ bin/3dANALYZEtoAFNI
 bin/3dANOVA
 bin/3dANOVA2
 bin/3dANOVA3
+bin/3dAcost
+bin/3dAllineate
 bin/3dAnatNudge
 bin/3dAnhist
 bin/3dAttribute
@ -29,21 +33,25 @@ bin/3dAutoTcorrelate
 bin/3dAutobox
 bin/3dAutomask
 bin/3dBRAIN_VOYAGERtoAFNI
+bin/3dBlurToFWHM
 bin/3dBrickStat
 bin/3dCM
 bin/3dCRUISEtoAFNI
 bin/3dClipLevel
 bin/3dConvolve
+bin/3dDFT
 bin/3dDTeig
 bin/3dDWItoDT
 bin/3dDeconvolve
 bin/3dDeconvolve_f
 bin/3dDespike
 bin/3dDetrend
+bin/3dEmpty
 bin/3dEntropy
 bin/3dExtrema
 bin/3dFDR
 bin/3dFWHM
+bin/3dFWHMx
 bin/3dFourier
 bin/3dFriedman
 bin/3dGetrow
@ -51,9 +59,11 @@ bin/3dIntracranial
 bin/3dInvFMRI
 bin/3dKruskalWallis
 bin/3dLRflip
+bin/3dLocalBistat
 bin/3dLocalstat
 bin/3dMINCtoAFNI
 bin/3dMannWhitney
+bin/3dMax
 bin/3dMean
 bin/3dMedianFilter
 bin/3dNLfim
@ -67,6 +77,7 @@ bin/3dSpatNorm
 bin/3dStatClust
 bin/3dSurf2Vol
 bin/3dSurfMask
+bin/3dSynthesize
 bin/3dTSgen
 bin/3dTagalign
 bin/3dTcat
@ -124,6 +135,44 @@ bin/3drotate
 bin/3dttest
 bin/3dvolreg
 bin/4swap
+bin/@2dwarper
+bin/@4Daverage
+bin/@AfniOrient2RAImap
+bin/@AfniOrientSign
+bin/@Align_Centers
+bin/@Center_Distance
+bin/@CheckForAfniDset
+bin/@CommandGlobb
+bin/@DTI_studio_reposition
+bin/@DoPerRoi.py
+bin/@FindAfniDsetPath
+bin/@FromRAI
+bin/@GetAfniID
+bin/@GetAfniOrient
+bin/@GetAfniPrefix
+bin/@GetAfniView
+bin/@IsoMasks
+bin/@NoExt
+bin/@Purify_1D
+bin/@RenamePanga
+bin/@SUMA_AlignToExperiment
+bin/@SUMA_Make_Spec_Caret
+bin/@SUMA_Make_Spec_FS
+bin/@SUMA_Make_Spec_SF
+bin/@ToRAI
+bin/@UpdateAfni
+bin/@VolCenter
+bin/@align_partial_oblique
+bin/@auto_align
+bin/@auto_tlrc
+bin/@clip_volume
+bin/@escape-
+bin/@fix_FSsphere
+bin/@float_fix
+bin/@make_stim_file
+bin/@np
+bin/@parse_afni_name
+bin/@parse_name
 bin/AlphaSim
 bin/AnalyzeTrace
 bin/CompareSurfaces
@ -133,6 +182,7 @@ bin/ConvexHull
 bin/CreateIcosahedron
 bin/DTIStudioFibertoSegments
 bin/Dimon
+bin/DriveSuma
 bin/FD2
 bin/FSread_annot
 bin/Ifile
@ -150,6 +200,7 @@ bin/SampBias
 bin/ScaleToMap
 bin/SurfClust
 bin/SurfDsetInfo
+bin/SurfInfo
 bin/SurfMeasures
 bin/SurfPatch
 bin/SurfQual
@ -161,13 +212,18 @@ bin/Xphace
 bin/abut
 bin/adwarp
 bin/afni
+bin/afni_base.py
+bin/afni_proc.py
+bin/afni_util.py
 bin/afni_vcheck
 bin/aiv
+bin/ask_me.py
 bin/byteorder
 bin/cat_matvec
 bin/ccalc
 bin/cdf
 bin/count
+bin/db_mod.py
 bin/dicom_hdr
 bin/dicom_to_raw
 bin/ent16
@ -182,6 +238,7 @@ bin/im2niml
 bin/imand
 bin/imaver
 bin/imcalc
+bin/imcat
 bin/imcutup
 bin/imdump
 bin/immask
@ -191,14 +248,15 @@ bin/imstack
 bin/imstat
 bin/imupsam
 bin/inspec
+bin/make_stim_times.py
 bin/mayo_analyze
-bin/mpegtoppm
 bin/mritopgm
 bin/myget
 bin/nicat
 bin/nifti1_test
 bin/nifti_tool
 bin/nsize
+bin/option_list.py
 bin/p2t
 bin/plugout_drive
 bin/plugout_ijk
@ -215,6 +273,7 @@ bin/siemens_vision
 bin/sqwave
 bin/strblast
 bin/suma
+bin/suma_change_spec
 bin/tfim
 bin/to3d
 bin/waver
@ -252,6 +311,7 @@ lib/afni/model_beta.so
 lib/afni/model_constant.so
 lib/afni/model_convgamma.so
 lib/afni/model_convgamma2a.so
+lib/afni/model_demri_3.so
 lib/afni/model_diffexp.so
 lib/afni/model_diffusion.so
 lib/afni/model_gammavar.so
@ -266,6 +326,7 @@ lib/afni/model_squarewave_ap.so
 lib/afni/model_squarewave_apf.so
 lib/afni/model_trnglwave_ap.so
 lib/afni/model_trnglwave_apf.so
+lib/afni/model_zero.so
 lib/afni/plug_3Ddump_V2.so
 lib/afni/plug_3ddot.so
 lib/afni/plug_3ddup.so
@ -314,6 +375,8 @@ lib/afni/plug_vol2surf.so
 lib/afni/plug_volreg.so
 lib/afni/plug_wavelets.so
 lib/afni/plug_zeropad.so
+%%DATADIR%%/AFNI.afnirc
+%%DATADIR%%/AFNI.sumarc
 %%DATADIR%%/Dist_Stamp
 %%DATADIR%%/Readme_dist
 %%DATADIR%%/TT_N27+tlrc.BRIK.gz
@ -328,11 +391,6 @@ lib/afni/plug_zeropad.so
 %%DATADIR%%/TT_N27_EZ_ML+tlrc.HEAD
 %%DATADIR%%/TTatlas+tlrc.BRIK.gz
 %%DATADIR%%/TTatlas+tlrc.HEAD
-%%DATADIR%%/face_erinskinner.jpg
-%%DATADIR%%/face_hang_joon_jo.jpg
-%%DATADIR%%/face_melissah.jpg
-%%DATADIR%%/face_sumabucks.jpg
-%%DATADIR%%/splash_sscc2006.jpg
 %%DATADIR%%/face_JimEliassen.jpg
 %%DATADIR%%/face_JohannaBaas.jpg
 %%DATADIR%%/face_SalloumJB.jpg
@ -342,6 +400,7 @@ lib/afni/plug_zeropad.so
 %%DATADIR%%/face_afniman.jpg
 %%DATADIR%%/face_agoldman.jpg
 %%DATADIR%%/face_ahammett.jpg
+%%DATADIR%%/face_alexandrakofinis.jpg
 %%DATADIR%%/face_anewmanetal.jpg
 %%DATADIR%%/face_anugent.jpg
 %%DATADIR%%/face_asanders.jpg
@ -366,9 +425,11 @@ lib/afni/plug_zeropad.so
 %%DATADIR%%/face_cscholl.jpg
 %%DATADIR%%/face_csenior.jpg
 %%DATADIR%%/face_cwettig.jpg
+%%DATADIR%%/face_daveperlman.jpg
 %%DATADIR%%/face_dglen.jpg
 %%DATADIR%%/face_einstein.jpg
 %%DATADIR%%/face_eli.jpg
+%%DATADIR%%/face_erinskinner.jpg
 %%DATADIR%%/face_ernv.jpg
 %%DATADIR%%/face_eteoh.jpg
 %%DATADIR%%/face_faustalui.jpg
@ -379,6 +440,9 @@ lib/afni/plug_zeropad.so
 %%DATADIR%%/face_ggiulietti.jpg
 %%DATADIR%%/face_glarkin.jpg
 %%DATADIR%%/face_grant.jpg
+%%DATADIR%%/face_guidon.jpg
+%%DATADIR%%/face_hamepark.jpg
+%%DATADIR%%/face_hang_joon_jo.jpg
 %%DATADIR%%/face_hanlon.jpg
 %%DATADIR%%/face_heekeren.jpg
 %%DATADIR%%/face_hoffmangobbini.jpg
@ -417,6 +481,7 @@ lib/afni/plug_zeropad.so
 %%DATADIR%%/face_mbeauchamp.jpg
 %%DATADIR%%/face_mbelmonte.jpg
 %%DATADIR%%/face_megcrew.jpg
+%%DATADIR%%/face_melissah.jpg
 %%DATADIR%%/face_mgarolera.jpg
 %%DATADIR%%/face_mkenney.jpg
 %%DATADIR%%/face_mmaieron.jpg
@ -450,12 +515,15 @@ lib/afni/plug_zeropad.so
 %%DATADIR%%/face_sjapee.jpg
 %%DATADIR%%/face_skammy.jpg
 %%DATADIR%%/face_skapdoskar.jpg
+%%DATADIR%%/face_sknoonan.jpg
 %%DATADIR%%/face_smarrett.jpg
 %%DATADIR%%/face_ssaad.jpg
 %%DATADIR%%/face_ssmall.jpg
 %%DATADIR%%/face_steverao.jpg
+%%DATADIR%%/face_sumabucks.jpg
 %%DATADIR%%/face_tieshan.jpg
 %%DATADIR%%/face_tolkien.jpg
+%%DATADIR%%/face_vdcosta.jpg
 %%DATADIR%%/face_vhradil.jpg
 %%DATADIR%%/face_vincent1.jpg
 %%DATADIR%%/face_vincent2.jpg
@ -491,63 +559,8 @@ lib/afni/plug_zeropad.so
 %%DATADIR%%/splash_marsalbor.jpg
 %%DATADIR%%/splash_mcw03.jpg
 %%DATADIR%%/splash_sscc03.jpg
+%%DATADIR%%/splash_sscc2006.jpg
 %%DATADIR%%/splash_vincent.jpg
-%%PORTDOCS%%%%DOCSDIR%%/1dplot.ps
-%%PORTDOCS%%%%DOCSDIR%%/24swap.ps
-%%PORTDOCS%%%%DOCSDIR%%/2dImReg.ps
-%%PORTDOCS%%%%DOCSDIR%%/2swap.ps
-%%PORTDOCS%%%%DOCSDIR%%/3T_toafni.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dANOVA.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dANOVA2.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dANOVA3.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dDeconvolve.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dExtrema.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dFDR.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dFWHM.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dFriedman.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dIntracranial.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dKruskalWallis.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dMannWhitney.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dNLfim.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dRegAna.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dStatClust.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dTSgen.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dTcat.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dTsmooth.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dWavelets.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dWilcoxon.ps
-%%PORTDOCS%%%%DOCSDIR%%/3daxialize.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dbuc2fim.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dbucket.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dcalc.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dclust.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dcolon.ps
-%%PORTDOCS%%%%DOCSDIR%%/3ddup.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dfim+.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dfim.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dfractionize.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dhistog.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dinfo.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dmaskave.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dmerge.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dnewid.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dnoise.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dnvals.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dpc.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dproject.ps
-%%PORTDOCS%%%%DOCSDIR%%/3drefit.ps
-%%PORTDOCS%%%%DOCSDIR%%/3drotate.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dttest.ps
-%%PORTDOCS%%%%DOCSDIR%%/3dvolreg.ps
-%%PORTDOCS%%%%DOCSDIR%%/4swap.ps
-%%PORTDOCS%%%%DOCSDIR%%/AFNI.changes.cox
-%%PORTDOCS%%%%DOCSDIR%%/AFNI.changes.rhammett
-%%PORTDOCS%%%%DOCSDIR%%/AFNI.changes.rickr
-%%PORTDOCS%%%%DOCSDIR%%/AlphaSim.ps
-%%PORTDOCS%%%%DOCSDIR%%/AlphaSim_fig.ps
-%%PORTDOCS%%%%DOCSDIR%%/FD2.ps
-%%PORTDOCS%%%%DOCSDIR%%/Nonparametric.ps
-%%PORTDOCS%%%%DOCSDIR%%/README
 %%PORTDOCS%%%%DOCSDIR%%/README.Ifile
 %%PORTDOCS%%%%DOCSDIR%%/README.attributes
 %%PORTDOCS%%%%DOCSDIR%%/README.bzip2
@ -568,41 +581,6 @@ lib/afni/plug_zeropad.so
 %%PORTDOCS%%%%DOCSDIR%%/README.volreg
 %%PORTDOCS%%%%DOCSDIR%%/README.web
 %%PORTDOCS%%%%DOCSDIR%%/README.ziad
-%%PORTDOCS%%%%DOCSDIR%%/RSFgen.ps
-%%PORTDOCS%%%%DOCSDIR%%/Table.ps
-%%PORTDOCS%%%%DOCSDIR%%/abut.ps
-%%PORTDOCS%%%%DOCSDIR%%/adwarp.ps
-%%PORTDOCS%%%%DOCSDIR%%/afni200.ps
-%%PORTDOCS%%%%DOCSDIR%%/afni_aux.ps
-%%PORTDOCS%%%%DOCSDIR%%/afni_plugins.ps
-%%PORTDOCS%%%%DOCSDIR%%/afni_register.ps
-%%PORTDOCS%%%%DOCSDIR%%/buckets.ps
-%%PORTDOCS%%%%DOCSDIR%%/byteorder.ps
-%%PORTDOCS%%%%DOCSDIR%%/ccalc.ps
-%%PORTDOCS%%%%DOCSDIR%%/cdf.ps
-%%PORTDOCS%%%%DOCSDIR%%/count.ps
-%%PORTDOCS%%%%DOCSDIR%%/fim2.ps
-%%PORTDOCS%%%%DOCSDIR%%/float_scan.ps
-%%PORTDOCS%%%%DOCSDIR%%/from3d.ps
-%%PORTDOCS%%%%DOCSDIR%%/ftosh.ps
-%%PORTDOCS%%%%DOCSDIR%%/imand.ps
-%%PORTDOCS%%%%DOCSDIR%%/imaver.ps
-%%PORTDOCS%%%%DOCSDIR%%/imcalc.ps
-%%PORTDOCS%%%%DOCSDIR%%/imdump.ps
-%%PORTDOCS%%%%DOCSDIR%%/immask.ps
-%%PORTDOCS%%%%DOCSDIR%%/imreg.ps
-%%PORTDOCS%%%%DOCSDIR%%/imrotate.ps
-%%PORTDOCS%%%%DOCSDIR%%/imstack.ps
-%%PORTDOCS%%%%DOCSDIR%%/imstat.ps
-%%PORTDOCS%%%%DOCSDIR%%/imupsam.ps
-%%PORTDOCS%%%%DOCSDIR%%/mritopgm.ps
-%%PORTDOCS%%%%DOCSDIR%%/nsize.ps
-%%PORTDOCS%%%%DOCSDIR%%/p2t.ps
-%%PORTDOCS%%%%DOCSDIR%%/sfim.ps
-%%PORTDOCS%%%%DOCSDIR%%/sqwave.ps
-%%PORTDOCS%%%%DOCSDIR%%/tfim.ps
-%%PORTDOCS%%%%DOCSDIR%%/to3d.ps
-%%PORTDOCS%%%%DOCSDIR%%/waver.ps
 %%PORTDOCS%%@dirrm %%DOCSDIR%%
@dirrm %%DATADIR%%
@dirrm lib/afni