biology/paml: fix the build with LLVM 11
LLVM 11 switched from -fcommon to -fno-common by default. This revealed a slight misposition of names in paml.h, which caused one symbol per enum that's not used anywhere. The fix just moves the names back so that the enums are named that, rather than creating new unused symbols. Reviewed by: zeising Approved by: jrm (maintainer) MFH: 2020Q3
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svn2git
2021-03-31 03:12:20 +00:00
svn path=/head/; revision=545542
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biology/paml/files/patch-src_paml.h
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biology/paml/files/patch-src_paml.h
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--- src/paml.h.orig 2020-08-20 16:14:50 UTC
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+++ src/paml.h
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@@ -372,9 +372,9 @@ void copySptree(void);
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void printSptree(void);
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-enum {BASEseq=0, CODONseq, AAseq, CODON2AAseq, BINARYseq, BASE5seq} SeqTypes;
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+enum SeqTypes {BASEseq=0, CODONseq, AAseq, CODON2AAseq, BINARYseq, BASE5seq};
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-enum {PrBranch=1, PrNodeNum=2, PrLabel=4, PrNodeStr=8, PrAge=16, PrOmega=32} OutTreeOptions;
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+enum OutTreeOptions {PrBranch=1, PrNodeNum=2, PrLabel=4, PrNodeStr=8, PrAge=16, PrOmega=32};
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/* use mean (0; default) for discrete gamma instead of median (1) */
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