From 0c02f94f15fed0aa31e66caea0cb868820ce9ad1 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Thu, 21 Mar 2019 22:47:21 +0100 Subject: [PATCH] gnu: Add r-picante. * gnu/packages/cran.scm (r-picante): New variable. --- gnu/packages/cran.scm | 29 +++++++++++++++++++++++++++++ 1 file changed, 29 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 1a5e4a3573..5bd164db30 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -11768,3 +11768,32 @@ R, enabling interactive analysis and visualization of genome-scale data.") "This package provides wrappers on @code{regexpr} and @code{gregexpr} to return the match results in tidy data frames.") (license license:expat))) + +(define-public r-picante + (package + (name "r-picante") + (version "1.8") + (source + (origin + (method url-fetch) + (uri (cran-uri "picante" version)) + (sha256 + (base32 + "1bcq2j7fs89c2jib68qq6la67rxyg9raryf162mwvjakpf6k19l1")))) + (build-system r-build-system) + (propagated-inputs + `(("r-ape" ,r-ape) + ("r-nlme" ,r-nlme) + ("r-vegan" ,r-vegan))) + (home-page "https://cran.r-project.org/web/packages/picante/") + (synopsis "Integrating phylogenies and ecology") + (description + "This package provides functions for phylocom integration, community +analyses, null-models, traits and evolution. It implements numerous +ecophylogenetic approaches including measures of community phylogenetic and +trait diversity, phylogenetic signal, estimation of trait values for +unobserved taxa, null models for community and phylogeny randomizations, and +utility functions for data input/output and phylogeny plotting. A full +description of package functionality and methods are provided by Kembel et +al. (2010).") + (license license:gpl2)))