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freebsd-ports/science
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Bryan Drewery 8878752220 - Does not build on 8.3-i386. Does build ok on 9.1-i386. 
ports/155546 may fix this. The issue is that the libtool linking stage
is not respecting the CC=gcc46 environment that is used to compile
the rest of the port first. This causes the linking to use 'cc' instead.

.libs/ctl.o(.text.__i686.get_pc_thunk.bx+0x0): In function `__i686.get_pc_thunk.bx':
: multiple definition of `__i686.get_pc_thunk.bx'
/usr/lib/crtbeginS.o(.gnu.linkonce.t.__i686.get_pc_thunk.bx+0x0): first defined here
*** Error code 1

Approved by:	portmgr (implicit)
2013-04-15 17:29:36 +00:00
..
2d-rewriter
2dhf
abinit
afni
avogadro - convert USE_CMAKE to USES 2013-03-22 20:06:14 +00:00
bddsolve
bft
bodr
brian
buddy
cdcl
cdf
cdo This changes almost all the "gnomehack" only USE_GNOME cases to USES= pathfix. 2013-03-19 13:04:30 +00:00
cgnslib - convert USE_CMAKE to USES 2013-03-22 20:06:14 +00:00
checkmol - update to 0.4e 2013-04-07 07:11:16 +00:00
chemical-mime-data
chemtool
chemtool-devel
clhep
colt
crf++
dcl
devisor Style: tab -> space. 2013-03-28 16:28:59 +00:00
dlpoly-classic
dtiquery
ecs Chase french/med upgrade. 2013-03-19 20:35:32 +00:00
elmer-eio
elmer-hutiter
elmer-matc
elmer-meshgen2d
elmergrid
elmerpost
epte
euler
fastcap
fasthenry update to 3.0wr-021113 2013-03-28 01:06:02 +00:00
felt
flounder
fvcom
fvcom-mpi
fvm Chase french/med upgrade. 2013-03-19 20:35:32 +00:00
g3data
gamess
gchemutils
gdis
getdp
ghemical
ghmm
gnudatalanguage Add an explicit dependency on pkgconf 2013-03-22 12:36:06 +00:00
gramps Convert a few remaining straglers from the unmaintined ports to pathfix 2013-03-28 17:56:37 +00:00
gromacs - Update to 4.6.1 2013-03-24 16:27:23 +00:00
gsmc
gsystem
gtamsanalyzer
gwyddion Mechanically convert unmaintained ports which use "gnomehack" to use "pathfix" instead. 2013-03-28 03:28:30 +00:00
h5utils
harminv
hdf
hdf5
hdf5-18
hdf-java
hs-bio
InsightToolkit - convert USE_CMAKE to USES 2013-03-22 20:06:14 +00:00
isaac-cfd Style: tab -> space. 2013-03-28 16:28:59 +00:00
jmol
jstrack
kalzium Fix plist 2013-04-03 11:25:06 +00:00
kmovisto
kst
kst2 - convert USE_CMAKE to USES 2013-03-22 20:06:14 +00:00
lamprop
libctl - Does not build on 8.3-i386. Does build ok on 9.1-i386. 2013-04-15 17:29:36 +00:00
libghemical This changes almost all the "gnomehack" only USE_GNOME cases to USES= pathfix. 2013-03-19 13:04:30 +00:00
libint
libkml
liblinear
liboglappth This changes almost all the "gnomehack" only USE_GNOME cases to USES= pathfix. 2013-03-19 13:04:30 +00:00
libquantum
libsvm
libsvm-python
linsmith
massxpert - convert USE_CMAKE to USES 2013-03-22 20:06:14 +00:00
mayavi
mbdyn
mcstas
medit
meep
mei
minc
minc2
mol2ps
mpb
mpqc
mpqc-mpich
ncs
netcdf
netcdf3-ftn
netcdf4 This changes almost all the "gnomehack" only USE_GNOME cases to USES= pathfix. 2013-03-19 13:04:30 +00:00
netcdf-ftn
nifticlib
omnetpp
openbabel - convert USE_CMAKE to USES 2013-03-22 20:06:14 +00:00
ovt
p5-Algorithm-SVMLight
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern
p5-Chemistry-Mok
p5-Chemistry-Mol
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR
p5-Geo-Coordinates-Converter
p5-Geo-Coordinates-Converter-iArea
p5-Geo-ReadGRIB
p5-Geo-WebService-Elevation-USGS
p5-PerlMol
p5-Physics-Unit
paje
paraview - convert USE_CMAKE to USES 2013-03-22 20:06:14 +00:00
peekabot This changes almost all the "gnomehack" only USE_GNOME cases to USES= pathfix. 2013-03-19 13:04:30 +00:00
pnetcdf
psi3
psychopy - Update to 1.76.0 2013-03-24 14:19:01 +00:00
py-DendroPy
py-h5py
py-hcluster
py-mdp
py-mlpy
py-netCDF4
py-obspy-core
py-obspy.db
py-obspy.gse2
py-obspy.imaging
py-obspy.iris
py-obspy.mseed
py-obspy.signal
py-obspy.taup - Fix bad plist prevents packaging 2013-04-07 12:01:13 +00:00
py-obspy.wav
py-obspy.xseed
py-paida
py-pydicom
py-scikit-learn
py-scimath
py-scipy
py-ws2300
pybrain
pycdf
pynn
pyteomics Add new port science/pyteomics: 2013-03-28 13:05:42 +00:00
pyteomics.biolccc - Rename pyBioLCCC to pyteomics.biolccc (follow upstream) 2013-03-28 13:10:23 +00:00
qcl
qtresistors
R-cran-AMORE
R-cran-bayesm
R-cran-DCluster
R-cran-e1071
R-cran-eco
R-cran-Epi
R-cran-epicalc
R-cran-snow - Update to 0.3-12 2013-03-27 20:52:59 +00:00
R-cran-som
ruby-dcl
ruby-gphys
ruby-netcdf
rubygem-ai4r
silo
simlib
step KDE/FreeBSD team presents KDE SC 4.10.1 ports! 2013-03-27 11:55:25 +00:00
svmlight
szip
udunits
v_sim
veusz
vmd Fix minor nit: use the canconical FreeBSD.org form for email addresses. 2013-03-17 16:44:03 +00:00
x11iraf
xmakemol
xmds
Makefile - Rename pyBioLCCC to pyteomics.biolccc (follow upstream) 2013-03-28 13:10:23 +00:00