From ad36c9cb17e2bea1a94a06920d107bf18996142c Mon Sep 17 00:00:00 2001 From: "Jason W. Bacon" Date: Sat, 2 Jan 2021 22:05:58 +0000 Subject: [PATCH] biology/gemma: Upgrade to 0.98.3 Minor bug fixes and enhancements Reported by: portscout --- biology/gemma/Makefile | 3 +-- biology/gemma/distinfo | 6 +++--- biology/gemma/files/patch-src_fastopenblas.h | 15 --------------- 3 files changed, 4 insertions(+), 20 deletions(-) delete mode 100644 biology/gemma/files/patch-src_fastopenblas.h diff --git a/biology/gemma/Makefile b/biology/gemma/Makefile index 716406573c16..aad0bc2e6196 100644 --- a/biology/gemma/Makefile +++ b/biology/gemma/Makefile @@ -1,8 +1,7 @@ # $FreeBSD$ PORTNAME= gemma -DISTVERSION= 0.98.1 -PORTREVISION= 6 +DISTVERSION= 0.98.3 CATEGORIES= biology MAINTAINER= jwb@FreeBSD.org diff --git a/biology/gemma/distinfo b/biology/gemma/distinfo index 8974b901c7c5..dde8eb92ac25 100644 --- a/biology/gemma/distinfo +++ b/biology/gemma/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1558018021 -SHA256 (genetics-statistics-GEMMA-0.98.1_GH0.tar.gz) = 6beeed4a9e727a96fdea9e86e39bbe9cbc9f0540ad3a1053814e95b0863a7e6b -SIZE (genetics-statistics-GEMMA-0.98.1_GH0.tar.gz) = 49569015 +TIMESTAMP = 1609514940 +SHA256 (genetics-statistics-GEMMA-0.98.3_GH0.tar.gz) = 8c27874634269f52a194a41048e70c17e2128563f56bb8ef59338a93147c61ba +SIZE (genetics-statistics-GEMMA-0.98.3_GH0.tar.gz) = 49572695 diff --git a/biology/gemma/files/patch-src_fastopenblas.h b/biology/gemma/files/patch-src_fastopenblas.h deleted file mode 100644 index 32d2c4b1b94c..000000000000 --- a/biology/gemma/files/patch-src_fastopenblas.h +++ /dev/null @@ -1,15 +0,0 @@ ---- src/fastopenblas.h.orig 2018-12-11 05:34:29 UTC -+++ src/fastopenblas.h -@@ -23,10 +23,12 @@ - - #include - #include -+/* Conflicts with gsl_cblas.h, included from gsl_matrix.h - extern "C" - { - #include // For OpenBlas / Atlas - } -+*/ - #include "gsl/gsl_matrix.h" - - void fast_cblas_dgemm(const enum CBLAS_ORDER Order,