From 8cc87f5485b49178402cbf4439ee2082fc0736e9 Mon Sep 17 00:00:00 2001 From: Wen Heping Date: Mon, 1 Jan 2018 08:24:53 +0000 Subject: [PATCH] - Update to 5.16.0 --- biology/libsbml/Makefile | 2 +- biology/libsbml/distinfo | 6 +++--- biology/libsbml/pkg-plist | 5 +++++ 3 files changed, 9 insertions(+), 4 deletions(-) diff --git a/biology/libsbml/Makefile b/biology/libsbml/Makefile index ab86a8745c83..9c2645bcb487 100644 --- a/biology/libsbml/Makefile +++ b/biology/libsbml/Makefile @@ -2,7 +2,7 @@ # $FreeBSD$ PORTNAME= libsbml -PORTVERSION= 5.15.0 +PORTVERSION= 5.16.0 CATEGORIES= biology devel MASTER_SITES= SF/sbml/${PORTNAME}/${PORTVERSION}/stable DISTNAME= libSBML-${PORTVERSION}-core-src diff --git a/biology/libsbml/distinfo b/biology/libsbml/distinfo index ed9bd9679f29..0992b26f8aaf 100644 --- a/biology/libsbml/distinfo +++ b/biology/libsbml/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1495154421 -SHA256 (libSBML-5.15.0-core-src.tar.gz) = f975bd1fe379cc7027fd3fed9d6ae92e6dd61dda09befdfd2ffb969c324a5c28 -SIZE (libSBML-5.15.0-core-src.tar.gz) = 13767144 +TIMESTAMP = 1514788152 +SHA256 (libSBML-5.16.0-core-src.tar.gz) = 8cd1d29536db951934690d83a69e02f017406bd31d95ed82f2ebae5745a36a08 +SIZE (libSBML-5.16.0-core-src.tar.gz) = 14716040 diff --git a/biology/libsbml/pkg-plist b/biology/libsbml/pkg-plist index 849a01b12757..b57cc332b73a 100644 --- a/biology/libsbml/pkg-plist +++ b/biology/libsbml/pkg-plist @@ -78,6 +78,7 @@ include/sbml/conversion/ConversionProperties.h include/sbml/conversion/SBMLConverter.h include/sbml/conversion/SBMLConverterRegister.h include/sbml/conversion/SBMLConverterRegistry.h +include/sbml/conversion/SBMLConverterTypes.h include/sbml/conversion/SBMLFunctionDefinitionConverter.h include/sbml/conversion/SBMLIdConverter.h include/sbml/conversion/SBMLInferUnitsConverter.h @@ -412,6 +413,7 @@ lib/cmake/sbml-static-config.cmake %%PORTEXAMPLES%%%%EXAMPLESDIR%%/perl/printsupported.pl %%PORTEXAMPLES%%%%EXAMPLESDIR%%/perl/promoteParameters.pl %%PORTEXAMPLES%%%%EXAMPLESDIR%%/perl/readSBML.pl +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/perl/renameSId.pl %%PORTEXAMPLES%%%%EXAMPLESDIR%%/perl/stripPackage.pl %%PORTEXAMPLES%%%%EXAMPLESDIR%%/perl/translateMath.pl %%PORTEXAMPLES%%%%EXAMPLESDIR%%/perl/unsetAnnotation.pl @@ -425,6 +427,7 @@ lib/cmake/sbml-static-config.cmake %%PORTEXAMPLES%%%%EXAMPLESDIR%%/python/addModelHistory.py %%PORTEXAMPLES%%%%EXAMPLESDIR%%/python/addingEvidenceCodes_1.py %%PORTEXAMPLES%%%%EXAMPLESDIR%%/python/addingEvidenceCodes_2.py +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/python/append_to_note.py %%PORTEXAMPLES%%%%EXAMPLESDIR%%/python/appendAnnotation.py %%PORTEXAMPLES%%%%EXAMPLESDIR%%/python/callExternalValidator.py %%PORTEXAMPLES%%%%EXAMPLESDIR%%/python/convertSBML.py @@ -448,6 +451,7 @@ lib/cmake/sbml-static-config.cmake %%PORTEXAMPLES%%%%EXAMPLESDIR%%/python/readSBML.py %%PORTEXAMPLES%%%%EXAMPLESDIR%%/python/replaceOneFD.py %%PORTEXAMPLES%%%%EXAMPLESDIR%%/python/setIdFromNames.py +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/python/stringInput.py %%PORTEXAMPLES%%%%EXAMPLESDIR%%/python/stripPackage.py %%PORTEXAMPLES%%%%EXAMPLESDIR%%/python/translateMath.py %%PORTEXAMPLES%%%%EXAMPLESDIR%%/python/unsetAnnotation.py @@ -523,6 +527,7 @@ lib/cmake/sbml-static-config.cmake %%PORTEXAMPLES%%%%EXAMPLESDIR%%/sample-models/from-spec/level-3/conversionfactor2.xml %%PORTEXAMPLES%%%%EXAMPLESDIR%%/sample-models/from-spec/level-3/delay.xml %%PORTEXAMPLES%%%%EXAMPLESDIR%%/sample-models/from-spec/level-3/dimerization.xml +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/sample-models/from-spec/level-3/enzymekineticext.xml %%PORTEXAMPLES%%%%EXAMPLESDIR%%/sample-models/from-spec/level-3/enzymekinetics.xml %%PORTEXAMPLES%%%%EXAMPLESDIR%%/sample-models/from-spec/level-3/events.xml %%PORTEXAMPLES%%%%EXAMPLESDIR%%/sample-models/from-spec/level-3/fullydeterminedevent.xml